| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04628 |
|---|
| Symbol | |
|---|
| ID | 6304661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1157379 |
|---|
| End bp | 1158851 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638436 |
|---|
| Product | acyl-CoA synthetase |
|---|
| Protein accession | YP_001912318 |
|---|
| Protein GI | 188575389 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCG ACTCGATCGC TTTCCACGCC CGTCTCTCAC CGCAACAGCT CGCCGCACGC
GATCTGTTGC TGGGCATCGA ATGGACCTAC GCCGAACTCG ACGCGTTGGT CGGCCGCCTG
GCTGCCATGC TGCGCAAGCG TGGCTGCGTC GATGGGGAGC GGCTGGCCGT ACTGGCGCGC
AATTCGGTGT GGCAAGTGGC ATTGCATTTC GCCTGCGGGC GGGTTGGCGC GATCTATGTG
CCGCTCAATT GGCGGTTGAG CGCAAGCGAG CTGGATGCGT TGCTGCAGCG CGCGCAGCCG
CGTCTGTTGC TAGGCGACGA TGTCGCTGCC GGTCGCACGG ACGTGGAAGC CCTGGCGGGT
TTCATCGCAA GTGCCGATGC CCTGGAGCCG GCCGACACGC CATCGATTCC GCCGGAACGT
GTCAGCCTGA TCCTATTTAC CTCCGGCACC TCCGGTCAGC CGAAGGGGGT GATGCTGAGT
GAGCAGAATT TGCAGCACGC GGCGCACAAC TTTGGCGTCA CCACGCGGGT GGACGCGCGC
AGCAGCTTTC TGTGCGAAGC GCCGATGTTT CACACCATCG GCCTGGTCAC CAATGTGCGC
CCGGTGCTGG CGGTGGGTGG CTCGATCCAG GTGTCGAATG GCTTCGAGCC CAAACGCACG
TTGGGCTGGT TCTCCGATCA ATCGCTGGGC ATCACCCACT ACGTCGGCGT GCCACAGATG
ATGCAGGCAT TCCGTCACCA GCCCGGCTTC GATGCGGCAG CGCTGCGTCA TCTCACCGCA
TTGGTCAGTG GCGGCGCGCC GCACGCCAGC GAGGATTTGC TCGGCTGGCT GGACGATGGC
ATCCCGATGG TCTGCGGTTT CGGCATGAGC GAAGCCGGCA CGGTATTTGG TATGTCGGTG
AATTGCGATG TGATCCGCAA CAAGCTGGGC GCAGCTGGCA TTGCAACGCC ATCGGTGCAG
ACGCGCGTGG TGGATGCCAA CGGCGACGAC TGCCCGGCGG GGGTTCCCGG TGAGCTGCTA
TTGCGCGGCC CCAACCTCAG CCCCGGTTAC TGGCGCGACC CGCAGGCCAG CGCCGAGGTG
CTCGATAGCG AAGGATGGTT CCGTACCGGG GATATCGTGC AGCGCGATGC CGACGGCTTC
TTCTGGGTGG TCGACCGCAA GAAGGACATG TTCATTTCCG GCGGCGAGAA CGTATATCCG
GCAGAGATCG AAGCGGTGCT CGCCGATCAC CCGCACATTC GCGAGTGCGC CGTCGTCGGC
ATGGCCGATC AGCAATGGGG CGAAGTGGGC TATCTGGCCA TCGTGCCGGC CGATGAGATG
ACGGATCTGG AAGAGATCCG CAGCTATCTG ATCACACGGC TGGCCAAGTA CAAGGTGCCC
AAGCACCTAC GCCTGGTGGA TGCATTGCCG CGCACGGCTA CCGGAAAGTT GCAGAAGGCG
GGCCTGAGGG ACGCCTTGGC CAGTGGAAAC TGA
|
|---|
| Protein sequence | MPTDSIAFHA RLSPQQLAAR DLLLGIEWTY AELDALVGRL AAMLRKRGCV DGERLAVLAR
NSVWQVALHF ACGRVGAIYV PLNWRLSASE LDALLQRAQP RLLLGDDVAA GRTDVEALAG
FIASADALEP ADTPSIPPER VSLILFTSGT SGQPKGVMLS EQNLQHAAHN FGVTTRVDAR
SSFLCEAPMF HTIGLVTNVR PVLAVGGSIQ VSNGFEPKRT LGWFSDQSLG ITHYVGVPQM
MQAFRHQPGF DAAALRHLTA LVSGGAPHAS EDLLGWLDDG IPMVCGFGMS EAGTVFGMSV
NCDVIRNKLG AAGIATPSVQ TRVVDANGDD CPAGVPGELL LRGPNLSPGY WRDPQASAEV
LDSEGWFRTG DIVQRDADGF FWVVDRKKDM FISGGENVYP AEIEAVLADH PHIRECAVVG
MADQQWGEVG YLAIVPADEM TDLEEIRSYL ITRLAKYKVP KHLRLVDALP RTATGKLQKA
GLRDALASGN
|
|---|
| |