| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04522 |
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| Symbol | rpsJ |
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| ID | 6304767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1256807 |
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| End bp | 1257121 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642638541 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001912418 |
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| Protein GI | 188575489 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000034971 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGGAAA AGCAAAAGAT CCGGATTCGG CTGAAGGCGT TCGATCATCG TTTGATCGAC
CGTTGGGCCA GCGAGATCGT CGAAACGGCT AAGCGGACCG GCGCGCAAGT GCGTGGCCCG
ATCCCGTTGC CGACCAAGAT TGAGCGCTAC ACCATTCTCG TATCACCGCA TGCCGACAAG
GATGCGCGTG ACCAATACGA AACCCGCACG CATAAGCGTG TGCTCGATAT CGTCGACCCG
AACGACAAGA CCGTGGACGC GCTGATGAAG CTCGAACTCG CGGCTGGCGT CGACGTCCAG
ATCAAGCTGA CCTGA
|
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| Protein sequence | MSEKQKIRIR LKAFDHRLID RWASEIVETA KRTGAQVRGP IPLPTKIERY TILVSPHADK
DARDQYETRT HKRVLDIVDP NDKTVDALMK LELAAGVDVQ IKLT
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