| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04516 |
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| Symbol | rplV |
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| ID | 6304773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1259824 |
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| End bp | 1260159 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642638547 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001912424 |
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| Protein GI | 188575495 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000201226 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGCGA AAGCAATCCT GCGCACCGCG CGCATCTCCC CGCAGAAGGC CCGCCTGGTC
GCTGATCAGG TGCGTGGTTT GTCCGCCGAG CGTGCGGTCA ATTTGCTGAA GTTCTCGGAC
AAGAAGGCTG CACACCTGAT CAAAAAGGTG GTGGAGTCGG CTATTGCCAA TGCCGAGAAC
AATCAGGGCG CGGATGTCGA CGAGCTGAAG GTCAAGACCA TCATGGTTGA TGAAGGTCCG
TCCCTGAAGC GTTTCATGGC GCGGGCGAAA GGCCGCGGTA CCCGCATCCT CAAGCGCACC
AGTCACATCA CTGTGATTGT CGGCGCCGCC AAGTAA
|
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| Protein sequence | MEAKAILRTA RISPQKARLV ADQVRGLSAE RAVNLLKFSD KKAAHLIKKV VESAIANAEN
NQGADVDELK VKTIMVDEGP SLKRFMARAK GRGTRILKRT SHITVIVGAA K
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