| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04509 |
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| Symbol | rplE |
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| ID | 6304780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1262524 |
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| End bp | 1263066 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642638554 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001912431 |
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| Protein GI | 188575502 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00526127 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACACTC GTCTCGAAAA GTTTTACAAG GAAAACGTGG TGCCGGCCCT GATGAAGGAA
TTCGGCTACA CCAATCCGAT GGAAGTGCCG AAGCTGGTCA AGGTCACGCT CAACATGGGC
GTGGGCGAAG CCGCTAGCAA CAAGAAGATT CTGGAAAATG CGGTCGCCGA CATGTCCAAG
ATCTCCGGCC AAAAGCCGGT GGTCACCAAG TCGCGCGTTT CAGTCGCATC CTTCAAGATT
CGTGACGGTT GGCCGATCGG CTGCAAGACC ACCTTGCGTC GCGCCAAGAT GTACGAATTC
CTGGATCGCC TGATCAACAT CTCGTTGCCG CGCGTGCGCG ACTTCCGTGG TGTGTCCGGT
CGCTCCTTCG ATGGTCGTGG CAATTTCAAC ATGGGTGTGA AGGAACAGAT CATCTTCCCG
GAAATCGACT TCGACGCGGT CGACGCGATT CGCGGTATGG ATATCGCCGT CACCACCACC
GCCAAGACGG ATGCGGAAGC GAAGGCGCTG CTGGCAGCGT TCAAGTTCCC GTTCCGTAAC
TGA
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| Protein sequence | MNTRLEKFYK ENVVPALMKE FGYTNPMEVP KLVKVTLNMG VGEAASNKKI LENAVADMSK
ISGQKPVVTK SRVSVASFKI RDGWPIGCKT TLRRAKMYEF LDRLINISLP RVRDFRGVSG
RSFDGRGNFN MGVKEQIIFP EIDFDAVDAI RGMDIAVTTT AKTDAEAKAL LAAFKFPFRN
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