Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04503 |
Symbol | rpsE |
ID | 6304785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1265144 |
End bp | 1265686 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642638559 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001912436 |
Protein GI | 188575507 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.271958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAG AACGTGCACC GCGGGGTCGT GATCGCGACC GTAACCGCGA AGAGAAAGTC GACGATGGCA TGATCGAAAA GCTGGTCGCG GTCAATCGCG TCAGCAAGAC GGTCAAGGGC GGTCGCCAGT TCACCTTCAC CGCGCTGACC GTGGTCGGCG ATGGTCTGGG CAAGGTCGGT TTCGGTTATG GCAAGGCGCG CGAAGTGCCG GTCGCCATCC AGAAGTCGAT GGAACAGGCG CGCAAGAACC TGGCCACTGT GGATCTGAAC AACGGCACCT TGTGGCATGC CGTCAAGTCG GGCCATGGTG CAGCACGCGT CTACATGCAG CCGGCTTCGG AAGGTACGGG CGTCATCGCA GGCGGCGCCA TGCGCGCTGT GCTCGAAGCG GTCGGCGTCA AGAACGTGCT GGCCAAGGCA GTTGGTTCGC GCAACCCGAT CAACCTGGTC CGCGCAACCC TGAAGGGTCT GTCGGAAGTG CAGTCGCCGG CCCGTGTTGC GGCCAAGCGT GGCAAGAAGG TGGAGGAGCT CAACCATGGC TAA
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Protein sequence | MAEERAPRGR DRDRNREEKV DDGMIEKLVA VNRVSKTVKG GRQFTFTALT VVGDGLGKVG FGYGKAREVP VAIQKSMEQA RKNLATVDLN NGTLWHAVKS GHGAARVYMQ PASEGTGVIA GGAMRAVLEA VGVKNVLAKA VGSRNPINLV RATLKGLSEV QSPARVAAKR GKKVEELNHG
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