| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04499 |
|---|
| Symbol | rpsM |
|---|
| ID | 6304789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1268023 |
|---|
| End bp | 1268379 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642638563 |
|---|
| Product | 30S ribosomal protein S13 |
|---|
| Protein accession | YP_001912440 |
|---|
| Protein GI | 188575511 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.662464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTA TTGCAGGCGT CAACCTGCCA GCCCAGAAGC ACGTCTGGGT CGGGTTGCAA
AGCATCTACG GCATCGGCCG TACCCGTTCG AAGAAGCTCT GCGAATCCGC AGGCGTTACC
TCGACCACAA AGATTCGTGA TCTGTCCGAA CCCGAAATCG AGCGCTTGCG CGCCGAAGTC
GGCAAGTATG TCGTCGAAGG CGACCTGCGC CGCGAAATCG GTATCGCGAT CAAGCGACTG
ATGGACCTGG GCTGCTATCG CGGTCTGCGT CATCGCCGTG GTCTCCCGCT GCGTGGTCAG
CGCACCCGTA CCAACGCCCG CACCCGTAAG GGTCCGCGCA AGGCGATCAG GAAGTAA
|
|---|
| Protein sequence | MARIAGVNLP AQKHVWVGLQ SIYGIGRTRS KKLCESAGVT STTKIRDLSE PEIERLRAEV
GKYVVEGDLR REIGIAIKRL MDLGCYRGLR HRRGLPLRGQ RTRTNARTRK GPRKAIRK
|
|---|
| |