Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04496 |
Symbol | rpoA |
ID | 6304792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1269478 |
End bp | 1270476 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642638566 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_001912443 |
Protein GI | 188575514 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGTTA CCGCCAACCA GGTTCTGCGC CCCCGTGGTC CGCAGATCGA ACGTCTTACC GACAACCGTG CCAAGGTCGT GATCGAACCC TTGGAGCGCG GTTACGGGCA CACGCTGGGC AATGCCCTGC GTCGTGTGTT GTTGTCGTCG ATCCCCGGTT TTGCGATCAC CGAGGTCGAG ATCGACGGCG TGCTGCACGA GTACACCACG GTCGAAGGGT TGCAGGAAGA CGTGCTTGAC GTCCTGCTGA ACCTGAAAGA CGTGGCGATT CGCATGCACA GTGGCGACAG CGCCACGCTG TCGTTGTCCA AGCAGGGTCC GGGTACGGTC ACTGCGGCCG ACATCAGGAC CGATCACAAC GTTGAGATCA TCAACGGCGA CCACGTGATC TGCCACCTGA CCAAAGACAC CGCATTGAAC ATGCGCTTGA AGATCGAGCG CGGCTTCGGC TATCAGCCGG CTGCTGCGCG TCGTCGTCCG GACGAAGAGA CCCGCACCAT CGGCCGTCTG ATGCTGGATG CGTCGTTCTC GCCCGTGCGT CGCGTTGCCT ACGCTGTGGA AGCTGCGCGT GTTGAACAGC GCACGGACCT CGACAAGCTG GTGATCGATA TCGAAACCAA CGGCACGATC GATGCCGAGG AAGCCGTGCG CACCGCCGCC GACATCCTCA GCGATCAGCT GTCGGTGTTC GGCGATTTCA CCCACCGCGA TCGCGGTGCG GCCAAGCCGG CTGCCAGCGG CGTGGATCCG GTGCTGCTGC GCCCGATCGA CGACCTGGAG CTGACCGTGC GTTCGGCCAA TTGCCTCAAG GCTGAGAGCA TCTACTACAT CGGCGATCTG ATCCAGAAGA CCGAAGTCGA GCTGCTCAAG ACCCCGAATC TGGGTAAGAA GTCGCTGACC GAAATCAAGG AAGTGCTGGC ACAGCGCGGC CTTGCATTGG GCATGAAGCT GGAGAACTGG CCGCCGGCCG GCGTCGCCCA GCACGGCATG CTTGGTTAA
|
Protein sequence | MTVTANQVLR PRGPQIERLT DNRAKVVIEP LERGYGHTLG NALRRVLLSS IPGFAITEVE IDGVLHEYTT VEGLQEDVLD VLLNLKDVAI RMHSGDSATL SLSKQGPGTV TAADIRTDHN VEIINGDHVI CHLTKDTALN MRLKIERGFG YQPAAARRRP DEETRTIGRL MLDASFSPVR RVAYAVEAAR VEQRTDLDKL VIDIETNGTI DAEEAVRTAA DILSDQLSVF GDFTHRDRGA AKPAASGVDP VLLRPIDDLE LTVRSANCLK AESIYYIGDL IQKTEVELLK TPNLGKKSLT EIKEVLAQRG LALGMKLENW PPAGVAQHGM LG
|
| |