Gene PXO_04398 details

Gene Information

• Locus tag: PXO_04398
• Symbol: ribAB
• ID: 6304539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1029659
• End bp: 1030798
• Gene Length: 1140 bp
• Protein Length: 379 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642638314
• Product: riboflavin biosynthesis protein ribAB
• Protein accession: YP_001912196
• Protein GI: 188575267
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase; [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTCG CGCCCGTTCC CGCGTTGCTC GAAGAGCTGC GCGCCGGTCG CATGGTGGTG 
ATCGTCGATG ACGAAGACCG CGAAAACGAA GGCGATCTGA TCATGGCCGC CGAGTTGGTC 
ACGCCCTCGG ACATCAACTT CATGGTCACC CACGCGCGTG GATTGGTTTG CCTGTCGCTG 
ACCGGCGAGC GCTGCGCGCA ACTGGGCCTG GCGCCGATGG TGCGCAACAA CACCGCGCAG 
TTCCAGACCA ACTTCACCGT CAGCATCGAG GCGGCCGAAG GCGTAACCAC CGGCATTTCC 
GCTTACGACC GCGCACATAC CGTGCGCACC GCGGTGCGTC CGGATGCCAA GCCGCAGGAT 
CTGAGCCAGC CGGGGCATAT CTTCCCGCTG ATTTCGCAGC TCGGTGGCGT GCTGACCCGC 
GCCGGCCACA CCGAAGCAGC CAGCGATCTG TCGATGCTGG CCGGGCTGGA ACCGGCCGGT 
GTGCTGGTGG AAGTGCTCAA CCCTGACGGC AGCATGGCGC GTCGCCCGCA GTTGGAAGTA 
TTTGCGCGCG AACACGGGTT GAAGATGGGC TCGATCGCCG ATCTGATCGC GTATCGGCTG 
GCCAACGAGC ACACCGTCGA GCGCGTGGAC GAGCGCGACA TCACCACCGA ATTCGGCCCG 
TTCAAGCTGG TGACCTACCG CGACCGCATC GCGCACGACC TGCACTTTGC GTTGGTGCGC 
GGCAGCGCCG ATCCGCATAC ACCCACCCTG GTGCGGGTGC AGGTGGAAAA TCCGCTGGCG 
GATCTGCTGC ACTGGCAGCG CGATGACTTC GGTGTGGCGG CCACCGATGC CTTGCGCGCG 
ATTGCGGCCG AGGGGCAGGG CGTGATGGTG GTGCTGTCGG CCCCGCGCGA CAGCGAATCG 
CTGCTGGCAC GGCTGCGCCA GCAACCCGAA GCCGCCGCCA ACGCCAAGGA TGTGAGTCAG 
TGGCGGCGTC ATGGCGCCGG CGCGCAGATC CTGGCCGAAC TGGGCCTGGG CAAGTTGCGT 
GTGCTGGGCA CTTCGCGGCG CCAGGTGGGG GTGGCCGGGT TCGGGCTGGA AGTGGTGGAG 
TATCTGGAAT GCCACGCTGG CGAGGGCGTG CGTTCGGTGC CGCCGTCTGC TGTCTCTTGA 

 

Protein sequence

MNFAPVPALL EELRAGRMVV IVDDEDRENE GDLIMAAELV TPSDINFMVT HARGLVCLSL 
TGERCAQLGL APMVRNNTAQ FQTNFTVSIE AAEGVTTGIS AYDRAHTVRT AVRPDAKPQD 
LSQPGHIFPL ISQLGGVLTR AGHTEAASDL SMLAGLEPAG VLVEVLNPDG SMARRPQLEV 
FAREHGLKMG SIADLIAYRL ANEHTVERVD ERDITTEFGP FKLVTYRDRI AHDLHFALVR 
GSADPHTPTL VRVQVENPLA DLLHWQRDDF GVAATDALRA IAAEGQGVMV VLSAPRDSES 
LLARLRQQPE AAANAKDVSQ WRRHGAGAQI LAELGLGKLR VLGTSRRQVG VAGFGLEVVE 
YLECHAGEGV RSVPPSAVS