Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04310 |
Symbol | |
ID | 6304459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 949298 |
End bp | 950143 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642638237 |
Product | ISXoo3 transposase ORF B |
Protein accession | YP_001912119 |
Protein GI | 188575190 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAGCG CACCGGCGCG TCGTGCGCTG GTGCGCGGGT GGATCGACGG TGGCGCCAGC GAGCGCTGCG CCCTGGCAGC GATCGGCATG AGCGCCAGTG CGCTGCGCTA TTGCCCGCGC GAGGACCGCA ACGTTGAGTT GCGCGAGCGC ATCCTTGCGT TGGCGCATCG CCATCGCCGC TATGGCGTGG GGATGATCTC TCTCAAGCTG CGGCAGGAAG GGCGTCTGGT GAACTATAAG CGGGTGGAGC GGCTGTATTG CGAGCAGCAG CTGCAGGTCC GCCGCCGCAC GCGTAAAAAG GTGCCGGTAG GCGAGCGTGC GCCGTTGCTG CGGCCCACCA AGACCAACCC GGTGTGGTCC ATGGACGTCG TGTTCGACCG CACCGCCGAA GGTCGGGCGA TCAAGTCTCT GGTGATCGTG GACGACGCAA CCCACGAAGC GGTCGCCATC GACGTGGAGC GTGCGATCTC GGGACACGGC GTTGTGCGCG TGCTGGATCG GTTCGCACAC AGTCGTGGCC TGCCGAAGAT GATCCGCACC GACAACGGCA AGGAGTTCTG TGGCAAGGCC ATGGTCGCCT GGGCGCATGC CAATGGTGTG CAGCTACGCC AGATCCAGCC TGGCAAGCCG AACCAGAATG CCTACGTCGA ATCCTTCAAC GGCCGGCTAC GCGACGAATG CCTCAACGAA CACTGGTTCC CAACGCTGCT GCATGCGCGC ACCGAGATCG AACGCTGGCG CCGCGAATAC AACCAACACC GCCCAAAGAA AGCAATCGGC GCAATGACGC CGGCAACGTA TGCCCAGCAG TTGGCCAATA GCGAGATCAT CACCCCCGGA CTCTAA
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Protein sequence | MVSAPARRAL VRGWIDGGAS ERCALAAIGM SASALRYCPR EDRNVELRER ILALAHRHRR YGVGMISLKL RQEGRLVNYK RVERLYCEQQ LQVRRRTRKK VPVGERAPLL RPTKTNPVWS MDVVFDRTAE GRAIKSLVIV DDATHEAVAI DVERAISGHG VVRVLDRFAH SRGLPKMIRT DNGKEFCGKA MVAWAHANGV QLRQIQPGKP NQNAYVESFN GRLRDECLNE HWFPTLLHAR TEIERWRREY NQHRPKKAIG AMTPATYAQQ LANSEIITPG L
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