Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04288 |
Symbol | lipB |
ID | 6304437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 925859 |
End bp | 926533 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642638215 |
Product | lipoate-protein ligase B |
Protein accession | YP_001912097 |
Protein GI | 188575168 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGAGCT CTGCGGTCGG CCTGCCTGCG CAGTTGCGCG ATCTTGGTCA TCAGAGCTAC GGCCCGGTGT GGCGTGCAAT GCAGCGTTTC ACCGATGCGC GCGATGAGCG CACCGCCGAC GAGGTCTGGG TCGTCGAGCA TGCGCCGGTG TTTACGCTGG GCCAGGCCGG CAAACCCGAG CACGTGCTGG CGCCCGGCGA TATTCCGGTG CTGCAGGTTG ATCGTGGCGG GCAAGTCACG TATCACGGCC CTGGCCAATT GGTCGTTTAC CCGCTGCTGG ATCTGCGTCG GCTCAAGATC GGTGTGCGCG ATTACGTGTG CAAGATCGAG CAGGCACTGA TCGGCATGCT GGACGAATGG AACATCGTGG CCGAGCGTCG CGACGGTGCC CCCGGCGTTT ATGTAGGTGG GGCCAAGATC GCTGCGCTCG GCATCCGCGT GCGGCGTGGC TGCACTTTCC ACGGGTTGTC GTTGAACGTG GACATGGATC TGGAGCCGTT TCACCGCATC AATCCCTGTG GCTACCAGGG CCTGCAGGTG ACCTCGGTGC TAGACTTGGG CGGCCCCTCC GGGATGGACG CCGTCAAGGC GGTGCTGCTT GAGCAACTGG CGCGCCAGTT CGGCCTCGTG CTGCAGCCCG CTTCCGCATT GCCCGACCTT TCGCTTCCGG CCTGA
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Protein sequence | MRSSAVGLPA QLRDLGHQSY GPVWRAMQRF TDARDERTAD EVWVVEHAPV FTLGQAGKPE HVLAPGDIPV LQVDRGGQVT YHGPGQLVVY PLLDLRRLKI GVRDYVCKIE QALIGMLDEW NIVAERRDGA PGVYVGGAKI AALGIRVRRG CTFHGLSLNV DMDLEPFHRI NPCGYQGLQV TSVLDLGGPS GMDAVKAVLL EQLARQFGLV LQPASALPDL SLPA
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