Gene PXO_04285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04285 
Symbol 
ID6304434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp923298 
End bp924503 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content64% 
IMG OID642638212 
Productpenicillin-binding protein 6 
Protein accessionYP_001912094 
Protein GI188575165 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCC GCTTCGCCGC CGCTGCCGTG GCCACGTTCG CCTTCGGCCT GGTCTGCGCC 
CAGACACCTG CGCCGCAGCC GATTCCCGCC GTGGCTGCCG CCCCGGCCGC CTTGCCGGTA
CCACCGGCAC CCGCACCGGC CGTGTCCAAG TCCTGGATCC TGATGGACTA CGCCACCGGG
CAGGTGCTGG CTGGTGAGAA CATCCACCAG CAGCTGGCCC CGGCCAGCAT CACCAAGGTG
ATGACGTCCT ACGTGGTCGC TGCCGAAATC AAGAACGGCA AGGTCAAGCG CGACGACCAG
GTCATGATGA GCGAGCGCGC CTGGCGCGAG GGCGGTGCGG GCACCGACGG CAGCTACAGC
GGCTTCCCGG TCAACCAGAC GGCGCGTCTG GAAGACATGG AAAAAGGCAT GGCGATCCAG
TCCGGCAACG ATGCCGCCAT CGCACTGGCC GAGCATGTGG CCGGTAGCGA AGAAGCCTTC
GCCTCGCTGA TGAACACCTA CGCCGCCAAG ATCGGCATGA AGGATTCGTA CTTCGTCAAC
GCGCACGGCT TGAGCGCCGA AGGGCACCAC TCCAGCGCTT ACGATCTGGC CATGCTGGGC
CGCGCGATGG TGCGCGATTA CCCGGACACC TACGCCTATA ACAAGATCAA GGAATTCCAG
GTCGGCAGCA TCAAGCAGAG CAACCGTAAC CGGCTGCTGT GGCGCGACCC GGCAGTGGAC
GGCATCAAGA CCGGCCACAC CTCCGAGGCC GGCTACTGCC TGCTGAGCTC GGCCAAGCGT
GACGACCAGC GCCTGATCGC CGTAGTCATG GGCGACAGTT CCGAAGAACA GCGCGCCACC
GATAGCCTGG CTCTGCTCAA CTGGGGCTTC CGCTTCTTCG AAACCCACAG CTTGTACGCG
CCCGGTAAGG TCGTGACCAA GCAGAAGGTC TGGAAGGGCC AGCAGGACGA AGTGCAACTC
GGCGTCGCAC AGCCGCTGCT GGTCAGCCTG CAGCGCGGCC GTTACAACGA CCTCAAGCCC
AGCATGGAAG TGCCCAAGAA CCTGCAGGCA CCGATCAAGC AGGGCCAGCA AGTCGGCACC
GTGAAGGTCA GCCTGGACGG CAAGGTCATC GCCCAGGCCC CGCTGGTCGC CATCAACGCG
GTCGAAGAGG GCGGATTCTT CAAGCGCCTC TGGGATGCGT TCTGGATGTG GTGGAAGTCG
GAGTAA
 
Protein sequence
MKFRFAAAAV ATFAFGLVCA QTPAPQPIPA VAAAPAALPV PPAPAPAVSK SWILMDYATG 
QVLAGENIHQ QLAPASITKV MTSYVVAAEI KNGKVKRDDQ VMMSERAWRE GGAGTDGSYS
GFPVNQTARL EDMEKGMAIQ SGNDAAIALA EHVAGSEEAF ASLMNTYAAK IGMKDSYFVN
AHGLSAEGHH SSAYDLAMLG RAMVRDYPDT YAYNKIKEFQ VGSIKQSNRN RLLWRDPAVD
GIKTGHTSEA GYCLLSSAKR DDQRLIAVVM GDSSEEQRAT DSLALLNWGF RFFETHSLYA
PGKVVTKQKV WKGQQDEVQL GVAQPLLVSL QRGRYNDLKP SMEVPKNLQA PIKQGQQVGT
VKVSLDGKVI AQAPLVAINA VEEGGFFKRL WDAFWMWWKS E