Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04285 |
Symbol | |
ID | 6304434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 923298 |
End bp | 924503 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642638212 |
Product | penicillin-binding protein 6 |
Protein accession | YP_001912094 |
Protein GI | 188575165 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCC GCTTCGCCGC CGCTGCCGTG GCCACGTTCG CCTTCGGCCT GGTCTGCGCC CAGACACCTG CGCCGCAGCC GATTCCCGCC GTGGCTGCCG CCCCGGCCGC CTTGCCGGTA CCACCGGCAC CCGCACCGGC CGTGTCCAAG TCCTGGATCC TGATGGACTA CGCCACCGGG CAGGTGCTGG CTGGTGAGAA CATCCACCAG CAGCTGGCCC CGGCCAGCAT CACCAAGGTG ATGACGTCCT ACGTGGTCGC TGCCGAAATC AAGAACGGCA AGGTCAAGCG CGACGACCAG GTCATGATGA GCGAGCGCGC CTGGCGCGAG GGCGGTGCGG GCACCGACGG CAGCTACAGC GGCTTCCCGG TCAACCAGAC GGCGCGTCTG GAAGACATGG AAAAAGGCAT GGCGATCCAG TCCGGCAACG ATGCCGCCAT CGCACTGGCC GAGCATGTGG CCGGTAGCGA AGAAGCCTTC GCCTCGCTGA TGAACACCTA CGCCGCCAAG ATCGGCATGA AGGATTCGTA CTTCGTCAAC GCGCACGGCT TGAGCGCCGA AGGGCACCAC TCCAGCGCTT ACGATCTGGC CATGCTGGGC CGCGCGATGG TGCGCGATTA CCCGGACACC TACGCCTATA ACAAGATCAA GGAATTCCAG GTCGGCAGCA TCAAGCAGAG CAACCGTAAC CGGCTGCTGT GGCGCGACCC GGCAGTGGAC GGCATCAAGA CCGGCCACAC CTCCGAGGCC GGCTACTGCC TGCTGAGCTC GGCCAAGCGT GACGACCAGC GCCTGATCGC CGTAGTCATG GGCGACAGTT CCGAAGAACA GCGCGCCACC GATAGCCTGG CTCTGCTCAA CTGGGGCTTC CGCTTCTTCG AAACCCACAG CTTGTACGCG CCCGGTAAGG TCGTGACCAA GCAGAAGGTC TGGAAGGGCC AGCAGGACGA AGTGCAACTC GGCGTCGCAC AGCCGCTGCT GGTCAGCCTG CAGCGCGGCC GTTACAACGA CCTCAAGCCC AGCATGGAAG TGCCCAAGAA CCTGCAGGCA CCGATCAAGC AGGGCCAGCA AGTCGGCACC GTGAAGGTCA GCCTGGACGG CAAGGTCATC GCCCAGGCCC CGCTGGTCGC CATCAACGCG GTCGAAGAGG GCGGATTCTT CAAGCGCCTC TGGGATGCGT TCTGGATGTG GTGGAAGTCG GAGTAA
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Protein sequence | MKFRFAAAAV ATFAFGLVCA QTPAPQPIPA VAAAPAALPV PPAPAPAVSK SWILMDYATG QVLAGENIHQ QLAPASITKV MTSYVVAAEI KNGKVKRDDQ VMMSERAWRE GGAGTDGSYS GFPVNQTARL EDMEKGMAIQ SGNDAAIALA EHVAGSEEAF ASLMNTYAAK IGMKDSYFVN AHGLSAEGHH SSAYDLAMLG RAMVRDYPDT YAYNKIKEFQ VGSIKQSNRN RLLWRDPAVD GIKTGHTSEA GYCLLSSAKR DDQRLIAVVM GDSSEEQRAT DSLALLNWGF RFFETHSLYA PGKVVTKQKV WKGQQDEVQL GVAQPLLVSL QRGRYNDLKP SMEVPKNLQA PIKQGQQVGT VKVSLDGKVI AQAPLVAINA VEEGGFFKRL WDAFWMWWKS E
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