| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04228 |
|---|
| Symbol | |
|---|
| ID | 6304292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 780683 |
|---|
| End bp | 781870 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642638070 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001911952 |
|---|
| Protein GI | 188575023 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.381913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTGC GCACGCTGGG CGCGCTGGTC GAGCGCTTCG GGCTGCATGG GCAGCAATTG
GGCGAAGTGG CGATGGGCGC GGTGATCAAG CACTCCTCGG ACTGGAATCT GGCCCGCGAG
GCGACGCTGT CGTCGGGTCT GTCGCCGCTG ACGCCGGGCA TCACCCTGCA GCGCGCCTGC
GGCACCAGCC TGGATTCGGT GATTACCATC GCCAACAAGA TCGCGCTGGG GCAGATCGAT
TCAGGCATCG GCGGCGGTTC GGACACCACC TCCGAAGTGC CGATCGTCTA CGGCAAGAAA
CTGCGCGCGC GGCTGTTGGC CGCCAATCGT GTCAAGGCCA CCGGCGACAA GCTCAAGACG
CTGTTGCGCG GCTTCAAGCT GGGCGAGCTC AAACCCGAAT TCCCCGGCGT GGCCGAACCG
CGCACCGGCA AGAGCATGGG CGACCACTGC GAGGACATGG CCAAGGAATG GAACATCTCG
CGCGATTCGC AGGACGAATG GGCGGTGGCC TCGCACCACA AGCTGGCCGC TGCGTATGAG
CGCGGTTTCT TCGATGCGCT GATCGCCCCG TTCCGCGGCG TCTCGCGCGA CAACATCCTG
CGCGCCGACA CCTCGCTGGA AAAACTCGCC ACGCTGCGTC CCGCCTTCGA CAAGACCTCC
GGCCGCGGCA CGCTCACCGC GGCCAATTCC ACTGCGCTGA CCGATGGCGC CGCCGCGGTG
CTGCTGTCCA GCGAAGTCTG GGCGCTGGCG CATGGTCACA CACCGATGGC CTATCTGCGC
GATGCACAAG TCGCGGCAGT CGATTTCGTG CATGGCCAAG GCCTGCTGAT GGCGCCGACC
ATCGCCGTGC CGCAAATGCT GGCACGACAG GGCCTGACCC TGCAGGACTT CGACATCTAC
GAAATCCACG AAGCCTTCGC TGCGCAGGTG CTGTGCACGC TGCGCGCGTG GGAGAGCGAG
GATTACTGCC GCAATCGCCT GGGCCTGGAT GCGCCGCTGG GCCGCATCGA CCCCGACAAG
ATCAACCCGC TGGGTTCCTC GCTAGCCACC GGCCACCCGT TCGCGGCCAC TGGTGCGCGT
GTGGTGGCCA CGGCCGCCAA GCAGCTGGAA GAACGCGGCG GCGGCCGTGC ATTGATTTCG
ATCTGCACCG CCGGCGGCAT GGGCGTGGTG GCGATTGTCG AGCGCTGA
|
|---|
| Protein sequence | MSVRTLGALV ERFGLHGQQL GEVAMGAVIK HSSDWNLARE ATLSSGLSPL TPGITLQRAC
GTSLDSVITI ANKIALGQID SGIGGGSDTT SEVPIVYGKK LRARLLAANR VKATGDKLKT
LLRGFKLGEL KPEFPGVAEP RTGKSMGDHC EDMAKEWNIS RDSQDEWAVA SHHKLAAAYE
RGFFDALIAP FRGVSRDNIL RADTSLEKLA TLRPAFDKTS GRGTLTAANS TALTDGAAAV
LLSSEVWALA HGHTPMAYLR DAQVAAVDFV HGQGLLMAPT IAVPQMLARQ GLTLQDFDIY
EIHEAFAAQV LCTLRAWESE DYCRNRLGLD APLGRIDPDK INPLGSSLAT GHPFAATGAR
VVATAAKQLE ERGGGRALIS ICTAGGMGVV AIVER
|
|---|
| |