Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04055 |
Symbol | def |
ID | 6304198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 701275 |
End bp | 701733 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642637979 |
Product | peptide deformylase |
Protein accession | YP_001911862 |
Protein GI | 188574933 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGGTCG ACTCTGCCGA GCTTGCCAGC CAGGCGTTCC AGGCGCTGCT GGATGACATG TTCCAGACCA TGTACGAGGC GCCGGGCATC GGCCTGGCTG CCAGTCAGGT GGACGTGCAC AAGCGTTTCA TGGTCATCGA CGTCAGCGAC GAGAAGAATC TGCCGCAGGT GTTCGTCAAC CCGGAAATCG TGAGCAAGCA GGGCGAGCAG CTGTGTCAGG AAGGCTGCCT GTCGGTACCC GGCATTTATG CCGATGTCAG CCGCGCCGAT GCGATCACGG TGCGCTATCT CGACCGCCAG GGCCAGGCGC AGGAACTGCA TGCCGACGGG CTGCTGGCCG TGTGCATCCA GCACGAAATG GACCACCTGG ACGGCAAGCT GTTCGTAGAT TATCTCTCGC CGCTCAAGCG CGAAATGGTG CGCAAGAAGC TGGCCAAACA GCGCAAGCAT GTGGCTTGA
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Protein sequence | MPVDSAELAS QAFQALLDDM FQTMYEAPGI GLAASQVDVH KRFMVIDVSD EKNLPQVFVN PEIVSKQGEQ LCQEGCLSVP GIYADVSRAD AITVRYLDRQ GQAQELHADG LLAVCIQHEM DHLDGKLFVD YLSPLKREMV RKKLAKQRKH VA
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