Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04020 |
Symbol | ctaD |
ID | 6304163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 664050 |
End bp | 665654 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642637944 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_001911827 |
Protein GI | 188574898 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCATA CCGCAGTCGA TCACCACGGA CACCACCAGC CCGGTTTCGT CGAGCGCTGG TTCTTTTCGA CCAATCACAA GGACATCGGC ACGCTGTACC TGCTGTTTTC CTTCGTGATG TTCATCATCG GCGCGGCGAT GAGCGTGGTG ATTCGCGCCG AATTGATGCA GCCCGGCTTG CAGTTCGTCA AACCGGAATT CTTCAACCAG ATGACCACCG TGCATGCACT GGTGATGATC TTCGGCGGCG TGATGCCGGC CTTCGTTGGC TTGGCCAACT GGATGATCCC GTTGCAGATC GGCGCACCGG ACATGGCGTT GCCGCGCATG AACAACTGGT CGTTCTGGCT GCTGCCGGTC GCCTTTACGC TGCTGCTGCT GACGCTGTTT CTGCCGGGCG GCGGACCAGC GGGTGGCTGG ACCTTGTACC CGCCGCTGTC GCTGCAAGGC GGCTACAACG TGGCTTTCAG CGTATTTGCG ATCCATGTGG CCGGCGTCAG TTCGATCATG GGCGCGATCA ACATCATCGC CACCGTGCTC AACATGCGCG CGCCGGGCAT CGATCTGTTG AAGATGCCGA TCTTCTGCTG GGCCTGGCTG ATTACCGCCT TCCTGCTGAT TGCGGTGATG CCGGTGCTGG CCGGCGCAGT GACCATGTTG CTCACAGACA AATTCTTCGG CACCAGTTTC TTCAACGCGG CCGGCGGCGG CGACCCGGTG ATGTATCAGC ACATCTTCTG GTTCTTTGGG CACCCCGAGG TGTACATCAT GATCCTGCCG GCGTTCGGCG TGGTCAGCGA AATCATCCCG ACCTTCAGCC GCAAGCCGCT GTTCGGTTAC CAGGCGATGG TGTACGCCAT CGCGGCGATC GCATTCCTGA GCTTCATCGT GTGGGCGCAC CACATGTTCA CCGTGGGCAT GCCGCTCGGT GGCGAAATCT ATTTCATGTT CGCCACGATG CTGATTTCCA TCCCGACCGG GGTGAAGGTG TTCAACTGGG TCAGCACGAT GTGGAAAGGC TCGCTGACCT TCGAATCGCC GATGTTGTGG GCAGTGGCGT TCGTGATCCT CTTCAGCATC GGTGGCTTTT CCGGCCTGAT GCTGGCGATC GTGCCAGCCG ACTTCCAGTA TCACGACACC TATTTCGTAG TGGCGCATTT TCACTACGTG CTGGTGACCG GCGCGGTGTT TGCGCTGATT GCGGCGGTGT ATTACTGGTG GCCCAAGTGG ACCGGGCGGA TCTACAACGA AACCTGGGCC AAGGTGCACT TCTGGTGGAC GATGGTGTTC GTCAATCTGC TGTTCTTCCC GCAGCACTTC CTCGGCCTGG CCGGCATGCC GCGGCGTATT CCTGATTACA ACGTAGTATT CGCCGACTGG AATCTGGTCA GTTCGATCGG TGCGTTCGGT ATGTTCGTCA CGCCGTTCCT GATGGCCGCG ATTCTGCTTT CCTCGCTGCG TAGTGGCGCG CGGGCAGACG CGCGTGCCTG GGAAGGTGCC AAGGGCCTGG AATGGACGGT TCCTTCGCCT GCCCCGGCGC ATACCTTTAC CGTGCCGCCG GTGATCAAGC CTGGAGACCT TGCGCATGAA GACATCGGTC ATTGA
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Protein sequence | MAHTAVDHHG HHQPGFVERW FFSTNHKDIG TLYLLFSFVM FIIGAAMSVV IRAELMQPGL QFVKPEFFNQ MTTVHALVMI FGGVMPAFVG LANWMIPLQI GAPDMALPRM NNWSFWLLPV AFTLLLLTLF LPGGGPAGGW TLYPPLSLQG GYNVAFSVFA IHVAGVSSIM GAINIIATVL NMRAPGIDLL KMPIFCWAWL ITAFLLIAVM PVLAGAVTML LTDKFFGTSF FNAAGGGDPV MYQHIFWFFG HPEVYIMILP AFGVVSEIIP TFSRKPLFGY QAMVYAIAAI AFLSFIVWAH HMFTVGMPLG GEIYFMFATM LISIPTGVKV FNWVSTMWKG SLTFESPMLW AVAFVILFSI GGFSGLMLAI VPADFQYHDT YFVVAHFHYV LVTGAVFALI AAVYYWWPKW TGRIYNETWA KVHFWWTMVF VNLLFFPQHF LGLAGMPRRI PDYNVVFADW NLVSSIGAFG MFVTPFLMAA ILLSSLRSGA RADARAWEGA KGLEWTVPSP APAHTFTVPP VIKPGDLAHE DIGH
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