| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03906 |
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| Symbol | |
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| ID | 6303831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 327978 |
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| End bp | 332051 |
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| Gene Length | 4074 bp |
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| Protein Length | 1357 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642637620 |
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| Product | exodeoxyribonuclease V beta chain |
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| Protein accession | YP_001911505 |
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| Protein GI | 188574576 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCA GCCACGTCAC CGACCCGTAC CTGCAGTTGC CGCTGCACGG CGTGCGCCTG
ATCGAAGCCA GCGCCGGCAC CGGCAAGACC TTTACGCTGG CCACCTTGTT TACCCGGCTG
GTGGTCGAGC GCGGCGTGCG CATCGGCCAG ATTCTCGCAG TGACCTTCAC CGAAGCGGCC
ACGCAGGAAC TGCGCCGTCG TATCCGCGAA CGCCTGGTGC TGGCTGCAAG CTTGGTGCCG
GATGCGCCTG TAGAAGCGGC CCTGGCCGCG AGCGAATCAC CCGCAATCCA GCTGCCTGGC
GCAACATCGG CTTCTGTAGC AGCGGCCCAG ACCGCGACCG ACCTCGCCGA CGATCCATCG
CGGCCAGGGC CGCTCCTCCA CGAAGCGCCC GACGCATTAC TCACCCGCGC CATCCTGGTC
ACGCATCTGA CCGGCGGCAG CGAAACACCC GCCGCCTTGC GCCGCCGTTT GCAGCAGGCG
GTGGAAGAGA TCGATCTGGC CGCGGTGTTC ACCATCCACG GCTTCTGCGC GCGCGTGCTG
CGCGAACACG CGCTGGAAAG CGGCCAGGCG TTCGCCGCGC CGGAACTGCT CGCCAACGAC
CGCCAATTGC TCGGCGAAGT CGCGGCCGAT CTGTGGCGAC AACGCGCCGC CGACGCGGCA
ATGGCCGAAG ACCTCATCGC GCTGTGGTCG GGCGGCCCCG AGGCCTTGGC CAGCGATCTG
CGCGCCCTGG TGCGGCATCC AACGCTGTTG CCGGCGGTCG CCACAACCAC CGACGATGCG
GCCGCCTTGC TGCAGGCCGT GCACGCGGCC AGCGACGCAT TGGCCGCCGC ATTCCAGGCG
CACGGCACCG CATTTTTCGA CGCCATCATG TCGGCCATCG ACGGCCGCAT TCTGAGCAAG
GTCAGCTACA AACCCGAGTG GTTGGCATCG TTGTGGCACT GGTTCGAAAG CTTCGCCGCT
GCGCCATCGC TCAATACGGT GCCGCATGCC AAGTTGCGCA AGTTGACCGC TGCGGAACTG
GCCGCCGGCA CCAACCAGAA ATTTGTCGAT CGCACGCCGG CTTCGCCGAT GAGCCATGAG
ATCGATGGCT ATCTCACTGC GCTGGCGCGT GTCCAAGCAT GGCGCAGCCG TCGCCGCATC
GCCCTGCTGC ACGCACTGCG CGACGACGCC ATCGCACGGC TCGCGCTGCT CAAGCGGCAA
CGCCGCGTGC AGACCTACGA CGACCTGGTC GATGGTGTCG CGCACGCATT GCAAGGCGCA
CAGGCCGATG CGTTGGTCGC ACGTCTGCGC ACGCAATACG CCATCGCGCT GGTGGACGAA
TTCCAGGACA CCGACGACCG CCAATGGTCG ATCTTTTCCA ACGTGTTCGG CGAAGGCCCG
CTGGCACACG CCGCTGGGCT GGAACCGGCG CTGTTTCTGA TCGGCGACCC CAAGCAGGCC
ATCTACGGCT TCCGTGGCGG CGATGTACGC ACCTATCTGG CCGCCGCAGT CACTGCCGAA
CCGGCGCCAC CGCTGAGCCA CAACTTCCGC TCGCGCCCCG GCGTGCTGGC GGCCATCGAC
GCGCTGTACG CGCAGGCCGG CTACAGCGAT GCCTTCCTCA CCGATGGCAT CGCCTTCCAT
CCGGTGCAGG CCGGCACCAA ACGCGTGGAT GCCGACCTGC AACGCGACGG CGCCACTGCT
CCTGCGTTGA CGCTGTGGCG CGCGCCGGAA CCGCCGCCGC CATCTGACGC GGCAGCGGCG
AAAACCAAGC AAGCAGGCAA GCCCAAGCCC TGGAGCGCCG GCCGCGCACG TGAGCTGGCC
ACCGCCGCCT GCGTCGCGGC GATCCGCGGC TGGTTGGCCG GTGGCCGCGA CGGCACTGCC
ACCATCAACG CGCGCCCGGT GCAGGCCGGC GATATCGCCG TGCTGGTGCG CAGCCACGGC
GAGGCCACGC GTATCCAGCA GGCGCTCGGC GCGGTGGGCA TTCCGGCCGT CGCGGCCGGC
AAACAAAGCT TGTTCGCCAC CGACGAAGCC TTGGAATTGC TCGCACTGCT GCAGGCCTTG
CTCGACCCGG GCGATGACAG CCGCCTGCGC GCCGCCTTGG CCACGGTGTT GATCGGCGAA
GACGCCATCG CCATCGCCGC ACTTGAACGC GACGGCGAGC GACACCGCCG CTGGCAGCAG
CAGGCGCTGG ACTGGCGCGA ACGCTGGCAG CGTGGCGGCC CGCTCGCCTT GATCGGCGAC
CTCGGCGCCA CGCACGGGCA ACGCCTGCTT GCCTTGGTCG ATGGCGAGCG CCGCCTCACC
AACTATCTGC AGCTGGCCGA ACTGCTGCAG GAAGCCGACG CCCGCGCGCT CGGCCCGCAT
GGCCTGGTCG ACTGGCTGTT GCGGCGCATC GCCAATGCCG ACGACAACGA TGACGCCCAG
CAATTGCGGC TGGAATCGGA CGCGCGCCGC GTGCAGATCG TCACTCTGCA CAAGAGCAAG
GGCCTGGAAT ATCCGCTGGT GTTTTTGCCG TATATCGGCA TCGGCCGCAG CGACAAAGGT
GCCGGCCGCC ATTGCGTGGT GCATGCGCCG GACAGTGGCC GTCAGCTGCA TTGGAAAATG
GATCGGGACG ACCCGACCTG GAGCGCCGCC GAAGCCGCCT GGAAGCAGGA ACAACGTGCC
GAAGACGCGC GGCTGCTCTA TGTCGGCCTG ACCCGTGCCG AGCACGCGTT GTGGATCGCC
AGCGGCCCGT TCCATCAGCA CGAACGCACC GCACTGGCCG GCATGTTGCG CGCGCTCGAC
GCTTTGCAGG GCGCCGCAGG CGAGGGCGCG GTGGTGGTCG ACACGTCCAC GCCGCCCGCC
CACCTGCCGC GGCTGCCGCC ACCGCGCGAG GCGCAGGTGC CGCCCGCCCG CAATCCGCAG
CGGCATATCG CCCCGGAATG GTGGGTCTAC AGCTTCACCC AGCTGGCCAA TGCCGATGCC
GGCGCCGCCA CCGACCCGAT GGCCAGCGCC ACCGTCGTCG GTAGCGGCGG CAGCGACGAA
CCGTCCGGCA GCGAAGCGGT CGCCGTGGCC GTGGGCACCG ACGCCGAACC GTTCGATCCA
CGCTTTGCCG GCAACCGCTT CGGCGTGGTG ATGCACGACG TGTTCGAACG CTGCGACTTC
GCCGCCTGGC AGGTCTGGCG ACCGGGCCAA CCCGCACCCG ACGGCCAGGC CGCGCCCATC
CTTGAGGCGC TGCAACGCGG CGGCTACGCC CAGGACGAAC TCGACGACGG CCTGGCCATG
CTGACCGCAC TGATCGGCCA CACCCTCACC GTGGCCTTGC CCGAAGGCCG CCTGGCCGAC
GTGCCCGAAC CGCAGCGCCG CAACGAAATG GAATTCCATT TCGCCATGCG GCCCACCCGC
GTCGAGGCGC TGCTCGCACT GCTGCATCGC TTCGGCGTGG TCGGCGACCG CCAGGCCTTC
GGCGCGCGTC AGCGGCTGGA AGGCCTGATG ACCGGCCTGA TCGACCTCAC CTACACCGTG
GACGGGCGCT GGTATGTGCT CGACTACAAA TCCAACCGCC TGCCCAGCTA CGACGCCGAT
GCCCTGGCCC GCGCCATGGC GCATAGCGAG TACGCGTTGC AGGCGCTGAT CTACACCGTG
GCCCTGCACC GCTGGTTGCG TTTCCGCCTG GGCGAGGCCT ACGACTACGC CCGCGACTTC
GGCGGCGTGC GCTATCTGTT CTGTCGCGGC CTGGATGCCG GACGTCATGC GGTGGTGGTG
GCTGCCGCAT CCGAATCCGA ATCCGTTGTC GAAACCGTCG GCAATTCCAT CGCAGGCCAG
CGCCTGCCCG ACTCCACCCG CGACTCCACA CTGGACAGAC CCGCCCCCGC CCCGAACTCC
GGCGCCACGA CCGCTGGCCT CGCGCGCGCG CCCTTGGGCG ATCCGGCGCC CGGCATCCAC
GCCTGGCGTT TCGAACCAGC GCTCGTGCAA GCCCTGGACG CCTTGTTCGC CGGCAAGCCG
TCAGATGCGC TGTCCAATGA CACGCTAGAG CAAGGCTCGG CCAACGGCCT TAAGCCCCTC
TCCCCCCGGG AGAGGGGTGA GGGTACGTCC ACACCAGGGA CGCCCACTCC ATGA
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| Protein sequence | MSISHVTDPY LQLPLHGVRL IEASAGTGKT FTLATLFTRL VVERGVRIGQ ILAVTFTEAA
TQELRRRIRE RLVLAASLVP DAPVEAALAA SESPAIQLPG ATSASVAAAQ TATDLADDPS
RPGPLLHEAP DALLTRAILV THLTGGSETP AALRRRLQQA VEEIDLAAVF TIHGFCARVL
REHALESGQA FAAPELLAND RQLLGEVAAD LWRQRAADAA MAEDLIALWS GGPEALASDL
RALVRHPTLL PAVATTTDDA AALLQAVHAA SDALAAAFQA HGTAFFDAIM SAIDGRILSK
VSYKPEWLAS LWHWFESFAA APSLNTVPHA KLRKLTAAEL AAGTNQKFVD RTPASPMSHE
IDGYLTALAR VQAWRSRRRI ALLHALRDDA IARLALLKRQ RRVQTYDDLV DGVAHALQGA
QADALVARLR TQYAIALVDE FQDTDDRQWS IFSNVFGEGP LAHAAGLEPA LFLIGDPKQA
IYGFRGGDVR TYLAAAVTAE PAPPLSHNFR SRPGVLAAID ALYAQAGYSD AFLTDGIAFH
PVQAGTKRVD ADLQRDGATA PALTLWRAPE PPPPSDAAAA KTKQAGKPKP WSAGRARELA
TAACVAAIRG WLAGGRDGTA TINARPVQAG DIAVLVRSHG EATRIQQALG AVGIPAVAAG
KQSLFATDEA LELLALLQAL LDPGDDSRLR AALATVLIGE DAIAIAALER DGERHRRWQQ
QALDWRERWQ RGGPLALIGD LGATHGQRLL ALVDGERRLT NYLQLAELLQ EADARALGPH
GLVDWLLRRI ANADDNDDAQ QLRLESDARR VQIVTLHKSK GLEYPLVFLP YIGIGRSDKG
AGRHCVVHAP DSGRQLHWKM DRDDPTWSAA EAAWKQEQRA EDARLLYVGL TRAEHALWIA
SGPFHQHERT ALAGMLRALD ALQGAAGEGA VVVDTSTPPA HLPRLPPPRE AQVPPARNPQ
RHIAPEWWVY SFTQLANADA GAATDPMASA TVVGSGGSDE PSGSEAVAVA VGTDAEPFDP
RFAGNRFGVV MHDVFERCDF AAWQVWRPGQ PAPDGQAAPI LEALQRGGYA QDELDDGLAM
LTALIGHTLT VALPEGRLAD VPEPQRRNEM EFHFAMRPTR VEALLALLHR FGVVGDRQAF
GARQRLEGLM TGLIDLTYTV DGRWYVLDYK SNRLPSYDAD ALARAMAHSE YALQALIYTV
ALHRWLRFRL GEAYDYARDF GGVRYLFCRG LDAGRHAVVV AAASESESVV ETVGNSIAGQ
RLPDSTRDST LDRPAPAPNS GATTAGLARA PLGDPAPGIH AWRFEPALVQ ALDALFAGKP
SDALSNDTLE QGSANGLKPL SPRERGEGTS TPGTPTP
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