| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03877 |
|---|
| Symbol | |
|---|
| ID | 6303857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 355498 |
|---|
| End bp | 356622 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642637646 |
|---|
| Product | Putative signal protein with EAL domain |
|---|
| Protein accession | YP_001911531 |
|---|
| Protein GI | 188574602 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTAACAG GCCCTAGGAA CGTCCTGATC AACCCCGACA CGCTGGCCGA CATCAATATT
CCCCCCGGCC TGCAACTTGC GATCGGTACG CCGGACGGGC AGCTTCTCAG CAGCACCGGC
ACCGCCGCCG AACAGTTGCT GATCGAACCC AGCGACGAAC GCGCGCCGGA CGACCGCGTG
CTGTCGCAGG TGTTGTTCGG ACGCGACCGC CGTGGCGAAT GGACGGCGGT GGTCACCGAG
CCGGTGGCCT ACCTGCGGGG TCCGCTGGCG GCGGCACGGT TACAACTGGT GCCGGTGGGC
ATCGCGGTGG CGCTGCTGCT GGTCGGTGCG GTGCTATGGG TGTCGCGGCG GCGGTTGTCG
CCACTGGCGC GGCCGGAAAT TGCAGTGCAA CGCGGCGAGT TCATCGTTCA CTATCAACCG
ATCATTGCAC TCGACAGCGG CGCCTGCGTC GGCGCCGAAG CGCTGGTGCG CTGGCAGCAA
CCCGACGGCG TATTGGTCCC GCCGGATGCC TTCATTCCGC TGGCCGAAGA AAGCGGCTTG
ATCCTGCCGA TCACCGATCT GGTGGTGGCC GAAGTCATTC GCGAACTCGG CCCCACCCTG
GCTGCCGACC CGGCGCTGCA CGTGGCCATC AATGTCTCCG CCGAAGACAT CAAAAGCAGC
CGGGTGCAGA GCGTACTGGA GCATGCGTTG CGTGGCACCG GCGTGGACAG CGGCCAGCTG
TGGGTGGAGG CGACCGAACG CAGCTTGATG GACATTGACG CGGCGCGTAC CACCATCATG
CGTCTGCGTG GCGCCGGCCA CACGGTGTCG ATCGACGACT TCGGTACCGG CTATTCGAGC
CTGCAGTATC TGCAAGGCCT GCCGCTGGAC GCGTTGAAGA TCGACAAGTC GTTCGTAGAT
ACCATCGGCA CCCACTCGGC CACCAGCGCG GTGAGCGCGC ACATCATCGA GATGGCAAAA
ACGCTGCGGC TGCGCACCAT TGCCGAAGGC GTCGAGCGGC AGGAACAGCT CGATTATCTA
CGCGCCCATG GCGTGGACCT GGCGCAAGGC TGGCTGTTCT CGCGCGCGTT GCCGGCCACC
GGTTTCATCG CCTACCACGC ACAGGCGCGC AGCACGGCGC ATTGA
|
|---|
| Protein sequence | MLTGPRNVLI NPDTLADINI PPGLQLAIGT PDGQLLSSTG TAAEQLLIEP SDERAPDDRV
LSQVLFGRDR RGEWTAVVTE PVAYLRGPLA AARLQLVPVG IAVALLLVGA VLWVSRRRLS
PLARPEIAVQ RGEFIVHYQP IIALDSGACV GAEALVRWQQ PDGVLVPPDA FIPLAEESGL
ILPITDLVVA EVIRELGPTL AADPALHVAI NVSAEDIKSS RVQSVLEHAL RGTGVDSGQL
WVEATERSLM DIDAARTTIM RLRGAGHTVS IDDFGTGYSS LQYLQGLPLD ALKIDKSFVD
TIGTHSATSA VSAHIIEMAK TLRLRTIAEG VERQEQLDYL RAHGVDLAQG WLFSRALPAT
GFIAYHAQAR STAH
|
|---|
| |