Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03854 |
Symbol | |
ID | 6303878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 380100 |
End bp | 381359 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642637667 |
Product | starvation sensing protein |
Protein accession | YP_001911552 |
Protein GI | 188574623 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCACAGA CTTCCGACTC CCCTGCACCG CTGCAAGGTT CTGCCCGCGA TCGCGAGATC GTCGAGGCAC GCGTCATCGT CACCTGCCCC GGCCGCAATT TCGTCACCTT GAAGATCCGC ACGCGCTCGG GCATCACCGG CGTGGGCGAT GCCACGCTCA ATGGGCGCGA ATTGGCGGTG GCCGCGTACC TGCAGGAACA CCTGGTGCCG AATCTGATCG GCCGCGACGC CGGGCGCATC GAAGACATCT GGCAGTTCTT CTACCGCGGC GCGTACTGGC GGCGCGGGCC GGTGACGATG AGTGCGATTG CCGCGGTGGA TGTGGCGTTG TGGGACATCC TGGGCAAGAT GGCCGGCATG CCGCTGTATC AGCTGCTTGG CGGGCGCTCA CGCGAAGGTG CGCTGGTGTA TGGGCATGCC AATGGCCGCG ATATCGCCGA AACCACCGAT GAAGTGGGCC GCTTCCGCGA GATGGGCTTT ATCGCGATTC GCGCGCAATG CGGCGTACCC GGCATCAAGA AGACCTACGG CATCTCCGTC GGTGGCAAGC CGTACGAACC GGCCGAAAGC GAGCTGCCCA CCGAAACCGT GTGGTCCACA CCGCGCTATC TCGGCGTGGT GCCCAAGTTG TTCGAGCAGT TGCGCAGCGA TCACGGCGAT GAGATCGAGC TGCTACATGA CGCGCATCAC CGGCTCACAC CGATCGAAGC CGCGCGCCTG GGCCGCGATC TGGAGCCGTA CCGGCTGTTC TGGCTGGAAG ACGCCACGCC GGCAGAAAAC CAACGTGCGT TCGAAATCAT TCGCCAGCAC ACCGTGACGC CGCTGGCGGT GGGTGAGGTG TTCAATTCGA TCTGGGACTG CAAGCACCTG ATCGAGCAGC AACTGATCGA TTACATCCGT ACCACGATTG TCCACGCCGG CGGCATCACC CACGTGCGCC GGCTGGCCGA CTTCGCCGCG CTGCATCAGG TGCGCACCGG CTTCCACGGC GCCACCGATC TTTCGCCGGT GTGCATGGGC GCAGCGCTGC ACTTCGATAC CTGGGTGCCC AATTTCGGCA TCCAGGAATA CATGTTCCAT TCCGACGAAG CCAATGCGGT GTTCCCGCAT GACTACATGT TCCGCGATGG CCGCCTGCAC TGCGGCGAGA CGCCCGGGCA TGGTGTGGAC ATCGACGAAA CGCTTGCAGC GAAGTATCCG TACGTGCCCA AACAGTTGCC GATCGCGCGA CTGGAAGACG GCGCGATGTG CGACTGGTGA
|
Protein sequence | MSQTSDSPAP LQGSARDREI VEARVIVTCP GRNFVTLKIR TRSGITGVGD ATLNGRELAV AAYLQEHLVP NLIGRDAGRI EDIWQFFYRG AYWRRGPVTM SAIAAVDVAL WDILGKMAGM PLYQLLGGRS REGALVYGHA NGRDIAETTD EVGRFREMGF IAIRAQCGVP GIKKTYGISV GGKPYEPAES ELPTETVWST PRYLGVVPKL FEQLRSDHGD EIELLHDAHH RLTPIEAARL GRDLEPYRLF WLEDATPAEN QRAFEIIRQH TVTPLAVGEV FNSIWDCKHL IEQQLIDYIR TTIVHAGGIT HVRRLADFAA LHQVRTGFHG ATDLSPVCMG AALHFDTWVP NFGIQEYMFH SDEANAVFPH DYMFRDGRLH CGETPGHGVD IDETLAAKYP YVPKQLPIAR LEDGAMCDW
|
| |