| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03648 |
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| Symbol | |
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| ID | 6303734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 212508 |
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| End bp | 214394 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642637525 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001911410 |
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| Protein GI | 188574481 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT GGTCCCTCGA CCAAGCCCGC AAGACCTATT CGATCCCGCA TTGGGCCGAC
GGGTATTTCG ATGTGAATGC TGCCGGACAC GTGGTGGTCA CCCCGACCGC CGATGGCCCG
GCGGTGTCGC TGCCCGAGGT GGTGGATGCC GCGCGCGCGG CCGGCGCCAA GCTGCCGCTG
CTGGTGCGTT TCCCGGACAT CCTGGGCCAG CGCCTGGGCA AGCTGCAGGC AGCGTTCGCG
CAGGCGCAGT CCGAATGGGA TTACGCCGGC GGCTACACGG CCGTGTATCC GATCAAGGTC
AACCAACACC GCGGCGTGGC CGGCACCCTG GCCAGCCATC ATGGCGACGG TTTCGGCCTG
GAAGCGGGCA GCAAGCCGGA GCTGATGGCG GTGCTGGCGC TGTCGCGTCC GGGCGGGCTG
ATCGTCTGCA ACGGCTACAA GGACCGTGAA TACATCCGCC TGGCGCTGAT CGGGCGCAAG
CTCGGCCTGC AGACCTTCAT CGTCATCGAA AAGCCTTCCG AACTGAACTT GGTGTTGGAA
GAAGCGCGCG CGCTGGACGT CAAGCCAGGC TTGGGCGTGC GCATGCGCCT GGCTTCGCTG
GGTGCGGGCA AGTGGCAGAA CAGTGGGGGC GACAAGGCCA AGTTCGGTCT CTCGCCACGC
CAGGTGCTGG ACCTGTGGAA GACGCTGCGC GACACCGAAT ATGCCGACAG CCTGAATCTG
CTGCATTTCC ATATGGGCTC GCAGATCTCC AATGTGCGCG ACATCGCCAA CGGCATGCGC
GAAGCCACGC GCTATTTCGT GGAGCTCTCG CGGCTGGGCG CGAAGATCAG CCATGTGGAT
GTGGGCGGCG GCCTGGGCAT CGACTACGAA GGCACGCGCT CGCGCAGCTA TTGCTCGATC
AACTACGGCC TGCACTCGTA CGCCAGCAAT ATCGTGCAGC CGCTGGCCAG CGCCTGCGAA
GAACACGGCC TGGCCCCGCC GCGCATCGTC ACCGAATGCG GGCGCGCGAT GACCGCGCAC
CACGCGGTGC TGATCGCCAA CGTCTCGGAA GTGGAGCAGG CGCCCGAAGG CCGCGTGCCG
GACGCGCACG CCGACGAACC GGCGGCGATC CGCCACCTGC GCGAGATCCA TGACGAGCTC
GATGTGCGCC CGGCAGTGGA ACTGTTCCAG GAAGCGCAGC ACTTCCATGC CGAAGGCTTG
AGCGCCTATG CACTGGGCCA GATCGACCTG ACCCACCGTG CACGCATCGA CGATTTGTTC
TATGCCATTG CCCACGGCGT GCGTGCGCGC CTGAGCTTCG ACGAGAAGAG CCATCGCCCG
GTGCTGGATG AGCTCAACGA GCGGCTGGTG GACAAGTATT TCGTCAACTT CAGCGTGTTC
GAGTCGATCC CGGATGTGTG GGCGATTGAT CAGGTGTTCC CGATCGTGCC GATCGAGCGC
TTGAACGAAG CGCCGCAGCG GCGCGGCATC ATCGCCGATA TGACCTGCGA TTCCGACGGC
ATGGTCAAGA CCTATGTCGA GAACGAAAGC CTGGACAGCT CGTTGCCGCT GCACAGCTTG
AATGCCGGTG AGAGCTATCG CATCGGCTTC TTCCTGGTCG GTGCCTACCA GGAAATCCTG
GGCGATATCC ATAACCTGTT CGGCGATACC GATGCGGTGG AAGTGGCGGT GGATGGCGAT
GGCTATCGCA TCGCGCAGCA GCGCCGCGGC GATACCACCG ACGTGATGCT GGATTACGTG
GGCTACCAAC TGGCCACGCT GCGTGCCACC TATGCCGAGC GCATCGCTGC CGCGCAACTG
CCACCCGAGC GCGCGCATGA ACTCAGCGCT GCGTTGGAAG CGGGCCTGAC CGGCTACACC
TATCTGTCCG ACGAACCGTT GGGCTGA
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| Protein sequence | MSDWSLDQAR KTYSIPHWAD GYFDVNAAGH VVVTPTADGP AVSLPEVVDA ARAAGAKLPL
LVRFPDILGQ RLGKLQAAFA QAQSEWDYAG GYTAVYPIKV NQHRGVAGTL ASHHGDGFGL
EAGSKPELMA VLALSRPGGL IVCNGYKDRE YIRLALIGRK LGLQTFIVIE KPSELNLVLE
EARALDVKPG LGVRMRLASL GAGKWQNSGG DKAKFGLSPR QVLDLWKTLR DTEYADSLNL
LHFHMGSQIS NVRDIANGMR EATRYFVELS RLGAKISHVD VGGGLGIDYE GTRSRSYCSI
NYGLHSYASN IVQPLASACE EHGLAPPRIV TECGRAMTAH HAVLIANVSE VEQAPEGRVP
DAHADEPAAI RHLREIHDEL DVRPAVELFQ EAQHFHAEGL SAYALGQIDL THRARIDDLF
YAIAHGVRAR LSFDEKSHRP VLDELNERLV DKYFVNFSVF ESIPDVWAID QVFPIVPIER
LNEAPQRRGI IADMTCDSDG MVKTYVENES LDSSLPLHSL NAGESYRIGF FLVGAYQEIL
GDIHNLFGDT DAVEVAVDGD GYRIAQQRRG DTTDVMLDYV GYQLATLRAT YAERIAAAQL
PPERAHELSA ALEAGLTGYT YLSDEPLG
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