| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03644 |
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| Symbol | |
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| ID | 6303738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 217835 |
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| End bp | 220555 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642637528 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001911413 |
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| Protein GI | 188574484 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTGA TGCAGTACGT TGCGATCAGT CAAGACGGTC GCACTCTCGA ACTCCAGTTT
GCCGGTCAGA ACGCTCCGCA TCCCAATCTG CTCTTTCCGC TGCGTCTGCA ACTAACCTGG
GCACTGAGCG AGCCGTTCAC CGCCGATGTC ACCTGCCTGA GCCAATCCTC GGCGATCGAA
CTCAAGACGC TGCTCGGCCA GCGCGCCGGC ATCACCATCC GGCACCACGA TGGTGAGCGC
AAGGTCAACG GCGTGGTGAC CGCCGTGCGG CAGCTGGGTG CCGATGGTGG CTTCTCCAGC
TACCGCTTGC GGATACAGCC CGCACTTGCC CTGCTGGCCT ACCGCCGTAC CTGCCGCATC
TTTCAGGACG TAAGCGTGCC GGACATCGTT GCGCAGATCG TGCAGGAGCA TCGCGCCAGC
AATCCCCCGA TCGCCGCCAG CTTCCGCCTG GACCAGCAAC TGCGCCAGAC CTACGCGCCG
CGCTCGTATT GCACGCAGTT CGACGAAGAC GACCTCGGCT TCATCCATCG CGTGCTGGCC
GAGGAAGGTA TCAACTACAC GTTTGTCTTC GCCGACGACC AGGGCGCCCC GACGCACACG
CTGGTGTTGT TCGACGACGT CAACGACTTG GCCCAGGCCA GCCCGGCCCG CATCGGCTAT
CGCCGTGCCG AAGACGCCAC GCCGGCCGAC AGCCTGCTGG CCTGGCAGGG CGAGCGGCAG
GTCATGACCT CGGCCACCAC CCTGGTGAGC TACGACTACA AGCCGGCCGC CTCCAGCAAC
GCGGACGATC GGTCCGTGAT CTACCAGGGC GAGGAAGGGC GCGCGGCCAG CGCCACGCTG
CGGGATTACA GCGCGCTGTC GCCCTACTAC GCCAGCGACA GTGCCGAATA CGCGCGCTAT
GCCCAGGTGC GCCAGACCTG GCACGACCAG CGGGCCAAGA CCTGGTATGG CGGTGCGACG
ACGCCTGGCC TGGAAGTCGG CACGTATGTC GAGATCGCCG ACCATCCATC GCTGGCTCAG
GACAGCAGCG AGCAGCGCCA GTTCGTGGTG ACCGAGCAGT TCCTGGACAT CACCAACAAC
CTGCCAGCGG ACATGACCCG CCAGCTGCCC AGCGGCCTGC TGGGGCTTTC CTCGGCCGAC
GTCGGTCCGC CACCATCACT GGCAGCGGTC CCCCCGCCAC CCGCAGGGGC CGCGCAATAC
CTGCGCTTTG CCGGCGTGCG GCGCGGTGTG GCCTTGGTGC CGTCGCGCGT CCCATCGCTG
CGCCGGCCCA CCGCATCGGG GCCGCAGACC GCCACGGTGG TCGGCAAGGC CGGCGAAGTG
GTCGATACCG ACGAAATGGG GCGCATCCTG GTCCAGATGC ACTGGCCGCT GGCGCAGGAG
CACGCCAAGG GCGGCGCCGA CGACGACGAG CGCTCCAGCA CGCGCGTGCG CTATGCCTCC
CCCTCGGCCA GTGAGGGGTT CGGGCACCAG TTCATCCCGC GCGTGGGCGA TGAGGTGTTG
ATCGAGTTCC TGCACGGCGA TATCGACCGA CCGATCGCCG TGGCGGTCAT CCACAACGGC
CGCCGGCCCA CCGCGGCGTT CAGCGGCGCC ATGGGGCTGC CGGGCAATCG CGCGCTCTCG
GGCATCCTCA CGCGCGAGCA CAACGGCAGT GGCGCCAATG AACTGCTGTT CGACGACACC
ACCGGGCAAC CGCGTGCGCG CCTGGCCAGC ACCCACCAGG CCAGTGAGTT GAATCTCGGC
TACCTGACCC ACCCACGGGC AGATGGCCAA GCTGACTCGC GCGGCCAAGG CGCCGAACTG
CGCACCGACG CGGCAGCGGC CTTGCGCGCT GCCCAGGGCA TGTTGCTGAC CACCTACGCG
CGCAGCCAGG CCGCAGGCCA CCAACTCGAC CGCGACGAAC TCGACGCGCT GTTGGCGCAA
TGCCTCGAAC TGTTCAAGGG CCTGGGCGAC TATGCCGCCC AGCACGGCGG GCAAGCGGTG
GAGACCGGCG GGCAGGACGC ACTACGGCAG GCACTGCAGG GCTGGCCCAG CGGCACCGAG
CGCAGCGCTG CAGGCAAGCC GTTGATGGCC TTCGCCGCCA GCGAGGGCAT GGTCAGTGCC
ACCCCGCACA GCCATCTCAG CTACGCCGGC CAGAACATCG ACAGCGTGGC GCAGCAACAC
CTGCAGCTGA CCAGCGGCCA GGCCACACGC GTGCATGCAG GGCAAGGGAT CGCGCTGTTC
GCGCAAGCGT CCGGCCTGAG CGCCATTGCC AACCAGGGTC CCGTGCACTT GCAGGCACAG
GCCGATGCCC TGGTGGCCAA CGCGCAGACC AACCTGCAAC TGACCGCCAA CACCGGCGAG
GTGTTGCTCA GCGCGCCACG GATCCGGCTG GTGGCCGAGG ACGGCAGTTT CCTGAGTATT
GGCGGCGGCA TCACGCTTGG CACCCAGGGC GGGGTCGAGC TGCACGCGGC CAGCCATGCA
TTGCTGGGAC CGTCCACCGA GCAGGCCGAC CGCCCCAGCT TCGGCAAGGA CGGCACCGAC
CAGAAATTCC AGCTGCACTA CCCCAGCCAC AGCGCGGACA CGCCCCAGCT TGCGGCCAAC
CAGCCCTACA GCATCACCCT GGAAGACGGC CGCGTCGTGC AAGGCGTTTC CGATGCCAAC
GGCCTGACCG ATCTGCTGCG CGATGAGGTC ACGCGCATTG CGCGCATCGA CGTCCACAAG
TCACCGGCCA GCGGCGGCTG A
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| Protein sequence | MDLMQYVAIS QDGRTLELQF AGQNAPHPNL LFPLRLQLTW ALSEPFTADV TCLSQSSAIE
LKTLLGQRAG ITIRHHDGER KVNGVVTAVR QLGADGGFSS YRLRIQPALA LLAYRRTCRI
FQDVSVPDIV AQIVQEHRAS NPPIAASFRL DQQLRQTYAP RSYCTQFDED DLGFIHRVLA
EEGINYTFVF ADDQGAPTHT LVLFDDVNDL AQASPARIGY RRAEDATPAD SLLAWQGERQ
VMTSATTLVS YDYKPAASSN ADDRSVIYQG EEGRAASATL RDYSALSPYY ASDSAEYARY
AQVRQTWHDQ RAKTWYGGAT TPGLEVGTYV EIADHPSLAQ DSSEQRQFVV TEQFLDITNN
LPADMTRQLP SGLLGLSSAD VGPPPSLAAV PPPPAGAAQY LRFAGVRRGV ALVPSRVPSL
RRPTASGPQT ATVVGKAGEV VDTDEMGRIL VQMHWPLAQE HAKGGADDDE RSSTRVRYAS
PSASEGFGHQ FIPRVGDEVL IEFLHGDIDR PIAVAVIHNG RRPTAAFSGA MGLPGNRALS
GILTREHNGS GANELLFDDT TGQPRARLAS THQASELNLG YLTHPRADGQ ADSRGQGAEL
RTDAAAALRA AQGMLLTTYA RSQAAGHQLD RDELDALLAQ CLELFKGLGD YAAQHGGQAV
ETGGQDALRQ ALQGWPSGTE RSAAGKPLMA FAASEGMVSA TPHSHLSYAG QNIDSVAQQH
LQLTSGQATR VHAGQGIALF AQASGLSAIA NQGPVHLQAQ ADALVANAQT NLQLTANTGE
VLLSAPRIRL VAEDGSFLSI GGGITLGTQG GVELHAASHA LLGPSTEQAD RPSFGKDGTD
QKFQLHYPSH SADTPQLAAN QPYSITLEDG RVVQGVSDAN GLTDLLRDEV TRIARIDVHK
SPASGG
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