Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03638 |
Symbol | |
ID | 6303743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 226962 |
End bp | 228638 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642637533 |
Product | hypothetical protein |
Protein accession | YP_001911418 |
Protein GI | 188574489 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCGT CACAACGGCC CGGAATCACG CCCTACGCGC TGGTATGGCT AGGTACGCTG CTGGCCTGGG TGGCGCTGAT CCTTTTCATC TACTATCGCC AATGGCAGTC AACAGGCGTG GAGGATTCCG GCTTGGGCAA CGATATTCGT AATGGTGTAT TGGCGATCAC CGCTCTGGTG GGCCTGGCCT TTGGAGGGCA TTGGCTGTGG AAGGTACGCA GCGCGGTGGC CAAGGACCCA GCGGCCATGG CAAGCGCCCA GGCCACGGCG GCGGCCGCGA CGCCGCACGG GCGCATGCTG GCTGGCGAGG GGGAACGCTA TGTCTTGGAG GTGCGCGGGC TGGGCCTGGC GGTAGGCGAC TACTACCAGA CGGTCTGGCA GGCCATACGG GAAGACGATG ACGCGTTTAA GTCTGTGCTT CCGCAAGATC CTAAGTACTA CGATCCAAAT ACGCGCATTG GCAGTGCCAG TCTGGCCGCC GGCACATCTT TTGGTGATGC GGCCAAGGAA GCGGTGGAGC GTTGGCCGCT GCCAGTGATC ATCCTTGGGC CGCCGACGAC GATCAATGAT GGCAGCACCA TGGCCAACGA GATTGCACTC GATCGGCAGT CCGAGAGTCT CGGGCTCACG CTGTTTCTTT GGCAGGAGGA CGCCAATGTG GCGAGTGCGC AGGCCACGCT TGAGCGGCTG TTCCAGTTCT TCGATCAGCA CCCAGACGTG CCAGAAGTGC TACTGGTTAG CAATGACTCT GAAGCAGACC GATATGGCTG GGAATCACCT GGAATGCCAA AGCGTCCTGC TGGTATCCAC GTCCCACTGA TGCCCGACAG CATGGTCGCG CTGTTGGTGG CGCGCAGCGA TCGGGTAGAC AGGTTGGTGC GCCCGTATGC CGTCGATGTG GACGATGGCA TCAACAAGGA CGATACGCAG TACGACATCA TCAAGTTGTG GAATTTCTTC TGGGAGAAGC GCGACGCCTT CGACGAGAAA TTCGAACGTG AACTCAAAGC CAAGGGCGTG AAGTTACCAG ATGGCCCCGG TGTACCCAAG GCCGATTGGT GGATTGCCCA ACTGCCCGAG TTGTGGAAGC AGATCAGCAA CAAGGGGCCG GGTGAGTTCA AGCCCAGCCC GTATCTGCCG GTGCGTTGGG CGCGCTGGCA GGTGCAGCAG TTCGACGAAT CTCCGTTGCT GGGCTACCTG CATCGCCCGG TGCATGTGCC CCTGACCGAC GAACAGGGCA AGCCACTCAA GCGTGCCGGG CAGGTGGAGG CGCTGCGCAA GGGCTGGGCC CAGGCCGTGT CGGCCCTACC GGAAGATGCC AAGCCCACGC GCGTGTTCTA CGACACCAGC CTGGATCGCG AATGGGTCAT TCCCCTGACG CAAGCGCTGC ACGGCAACGC CGAGGGCATC GAACTGGACG ACAAGCATGA GGGCTACAAC ATCGGTCGGC GGCTGGGCAA TACCGGTGTC AGTTCCGCGC TAGTGCAGAT CGGGTTGGCG ATACAGGCCG GCTATGAAGA CGACCGCACC AGTGCGACGG TCAACCTGAC TCCCGATGGC TACGCCGGCA TCGTGATGGT CAGCCCGCCG GATGCGGCCA GCAAGGGCAT CAATACCAAG CATCGCGGCA AGAATCCTTT CATGGCGCAT GTCCCCGGAT GGCAAGACCC TCAATGA
|
Protein sequence | MSASQRPGIT PYALVWLGTL LAWVALILFI YYRQWQSTGV EDSGLGNDIR NGVLAITALV GLAFGGHWLW KVRSAVAKDP AAMASAQATA AAATPHGRML AGEGERYVLE VRGLGLAVGD YYQTVWQAIR EDDDAFKSVL PQDPKYYDPN TRIGSASLAA GTSFGDAAKE AVERWPLPVI ILGPPTTIND GSTMANEIAL DRQSESLGLT LFLWQEDANV ASAQATLERL FQFFDQHPDV PEVLLVSNDS EADRYGWESP GMPKRPAGIH VPLMPDSMVA LLVARSDRVD RLVRPYAVDV DDGINKDDTQ YDIIKLWNFF WEKRDAFDEK FERELKAKGV KLPDGPGVPK ADWWIAQLPE LWKQISNKGP GEFKPSPYLP VRWARWQVQQ FDESPLLGYL HRPVHVPLTD EQGKPLKRAG QVEALRKGWA QAVSALPEDA KPTRVFYDTS LDREWVIPLT QALHGNAEGI ELDDKHEGYN IGRRLGNTGV SSALVQIGLA IQAGYEDDRT SATVNLTPDG YAGIVMVSPP DAASKGINTK HRGKNPFMAH VPGWQDPQ
|
| |