Gene PXO_03620 details

Gene Information

• Locus tag: PXO_03620
• ID: 6303761
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 244562
• End bp: 246484
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642637551
• Product: ATP-dependent DNA helicase Rep
• Protein accession: YP_001911436
• Protein GI: 188574507
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases
• TIGRFAM ID: [TIGR01074] ATP-dependent DNA helicase Rep

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTGGTGC TGGCCGGCGC CGGCAGCGGC AAGACGCGCG TGATCGTGGA AAAGATCGCG 
CATCTGATCG CCATCGGCCG CTATCCGGCC AAGCGCATCG CCGCGATCAC CTTCACCAAC 
AAATCCGCCA AGGAAATGGG CGAGCGTGTG GCCAAGCGCA TCCGCGGCGA CGGTGCCGAC 
GGCCTGACCA TCTGCACCTT CCACGCGCTG GGCCTGAAGT TCCTGCAGAT CGAGCACGCC 
GCCGCCGGTT TGAAGCGCGG CTTTTCGATC TTCGATTCCG ACGATGCCGC CGCGCAGATC 
AAGGACCTGA TGCATGGTGC CAAGCCCGAT GCGATCGAAG ATGCCAAGAA CCTGATCTCG 
CGCGCCAAGA ACGCCGGCCT GTCGCCCGAG CAGGCGATGG TGGCGGCACG CAGCAACCGC 
GAAAAAGAAG CGGCCAGCTT GTACGAGCGC TACCAGGCGC GGTTGACCAC CTTCAACGCA 
GTGGATTTCG ATGACCTGAT CCGCCTGCCG GTGCAGATTC TGGAAGCAAA CGAAGACATC 
GTGATGGGCT GGCGCGAGCG CATCGGCTAT TTGCTGGTGG ACGAGTGCCA GGACACCAAC 
GATGCGCAGT ACCGCCTGCT GAAGATGCTG GCCGGGCCGC GCGGCAACTT CACCTGCGTG 
GGCGATGACG ACCAGAGTAT CTACGCGTGG CGCGGCGCCA ATCCGGAAAA CCTGCAGCAG 
ATGGCGCGCG ATTATCCGGC GCTGAAAATC ATCAAGCTGG AGCAGAACTA CCGCTGCTCC 
AATCGTGTGC TGCGTGCGGC CAATGCGTTG ATCGCGCACA ACCCACACGA GCATTTGAAG 
ACACTGTGGA GCGACCAGGC CGACGGCGAG CGCATCCGCG TGTGGGAATG CCGCGACAGC 
GAGCACGAGG CCGAAAAGGT TGCTGCGGAG ATTTCGTTCC TTGGCACCGC CAAGCAGGTG 
TCGTGGAGCG ATTTCTGCAT TCTGTTCCGT GGAAATTTTC AGTCGCGGCC GCTGGAAAAA 
GCGCTGCAGC TGTTGCGCGT GCCGTATCAC CTGACTGGTG GTACCGCGTT TCTGGAGCGG 
CAGGAGGTCA AGGATCTGCT GTCGTGGTTG CGGTTGATCG TCAACCCGGA CGACGATGCG 
GCGTTCTTGC GTGCGGTGCA ATCGCCCAAG CGCGAAGTCG GTGCGACCTC GCTGGCGCGT 
CTGGCCGAGT TGGCCAGCGC CAAATCGGTG CCGATGTCGC GCGCGGCCGA GTCGATGGGC 
GCCTTGCAGC ACCTGCCGCC CCGCGCCGCC AATGGGTTGA GTGCCTTTAC CGACATCGTG 
CGCGACATGC GCGAGCACTC GGCCAGCATG CCGGCCGGCG AACTGGTGCG CACGCTCGCG 
GAAAAATCCG GACTGCTCAA CGACCTGCGC AATCAGTCCA AGGACGAAAC CGGCTTCCAG 
CGGCGCAAGC GCAATCTGGA CGAGTTGGCC GAGTGGTTCG AAGGCGGCCC GCGTGGTGCA 
AGCGCCAGCG ATCTGGCTGC GCAGCTGGCG CTGCTGTCGC GCAACGACAA GGACGATGGC 
GGCAACCAGG TGCGCATGAT GACCATGCAT GCGTCCAAGG GTCTGGAGTT CCGCTATGTG 
TTCATCGTCG GCTGCGAGGA CGGCGTGCTG CCGCACGAAG TGAGCCTGGA AGAAGGCAAT 
CTGCAGGAAG AACGCCGTTT GTTGTACGTG GGCATCACCC GCGCCAAGGA GCAGTTGTGG 
ATGAGCCACA GCAAGCTGAC GCGCAAGTTC GGCGAGCATG TGCGACTGAA GCCGAGCCGG 
TTTTTCGATG AAATTCCTGC CGAAGAACTG CAGCGCGATG GCGCCGACCC GGTGGCCGAC 
GCTGAGCGCA AGAAAGAACG CGCCAGTGCG GGATTGGCTG CGATCCAGGC ATTGTTCGAC 
TGA 

 

Protein sequence

MLVLAGAGSG KTRVIVEKIA HLIAIGRYPA KRIAAITFTN KSAKEMGERV AKRIRGDGAD 
GLTICTFHAL GLKFLQIEHA AAGLKRGFSI FDSDDAAAQI KDLMHGAKPD AIEDAKNLIS 
RAKNAGLSPE QAMVAARSNR EKEAASLYER YQARLTTFNA VDFDDLIRLP VQILEANEDI 
VMGWRERIGY LLVDECQDTN DAQYRLLKML AGPRGNFTCV GDDDQSIYAW RGANPENLQQ 
MARDYPALKI IKLEQNYRCS NRVLRAANAL IAHNPHEHLK TLWSDQADGE RIRVWECRDS 
EHEAEKVAAE ISFLGTAKQV SWSDFCILFR GNFQSRPLEK ALQLLRVPYH LTGGTAFLER 
QEVKDLLSWL RLIVNPDDDA AFLRAVQSPK REVGATSLAR LAELASAKSV PMSRAAESMG 
ALQHLPPRAA NGLSAFTDIV RDMREHSASM PAGELVRTLA EKSGLLNDLR NQSKDETGFQ 
RRKRNLDELA EWFEGGPRGA SASDLAAQLA LLSRNDKDDG GNQVRMMTMH ASKGLEFRYV 
FIVGCEDGVL PHEVSLEEGN LQEERRLLYV GITRAKEQLW MSHSKLTRKF GEHVRLKPSR 
FFDEIPAEEL QRDGADPVAD AERKKERASA GLAAIQALFD