Gene PXO_03561 details

Gene Information

• Locus tag: PXO_03561
• Symbol: sodC
• ID: 6303820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 313049
• End bp: 313660
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642637609
• Product: superoxide dismutase
• Protein accession: YP_001911494
• Protein GI: 188574565
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2032] Cu/Zn superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGACCG CCTGCAAGCG CGACGAGCCG GCACCGGCCG ACCCGGCACC CGCCCCGCAG 
GCCAGCACGC CGGCCGAAGC GGCGCACGGC GGCGAACATG CCGCCTCCAT GGTCACCGAA 
GCGGCGGCCA CTACCACCGC AACCGCCGAG CTTAAGCCGA CCAAGGGGAA TGACGTCAAA 
GGCACGGTGA CCTTCAAAAC TGTCGATGGC GCATTGCGTG TCACCGGCCA GCTGAGCGGC 
CTCAAGCCCA ACACCGAGCA CGGCTTCCAT ATTCACGAAA AGGGCGATTG CAGCGCACCG 
GACGGCAGCA GCGCCGGCGG CCACTTCAAC CCGTCCCAGT CCGATCACGG CAACGTCAGC 
GCCGAACCGC ATCACGGCGG CGACATGCTC AACATCAAGT CCGATGCGCA GGGCAACGTC 
ACAATCGACG GCCCGGTGTC CAGCAACGTC AATCTCGCTA AGGCCAACCA GTTCGATATC 
GCCGGCCACG CGGTGATCGT GCATGCCGAT GCGGACGATT ACAAAACCCA GCCCACCGGC 
AACGCTGGCG GCCGTCTGGC CTGTGGCGTG ATCACCACCG ACAACGCGCA GGCGGCGACA 
CGTTACTCAT AA 

 

Protein sequence

MLTACKRDEP APADPAPAPQ ASTPAEAAHG GEHAASMVTE AAATTTATAE LKPTKGNDVK 
GTVTFKTVDG ALRVTGQLSG LKPNTEHGFH IHEKGDCSAP DGSSAGGHFN PSQSDHGNVS 
AEPHHGGDML NIKSDAQGNV TIDGPVSSNV NLAKANQFDI AGHAVIVHAD ADDYKTQPTG 
NAGGRLACGV ITTDNAQAAT RYS