| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03539 |
|---|
| Symbol | |
|---|
| ID | 6308603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 5190262 |
|---|
| End bp | 5193693 |
|---|
| Gene Length | 3432 bp |
|---|
| Protein Length | 1143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642642316 |
|---|
| Product | putative ATP-binding protein |
|---|
| Protein accession | YP_001916141 |
|---|
| Protein GI | 188579212 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4913] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.12714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTT CTTCCTCCAG CCTGTTTGCC GACGATCTGC CCGAGCCGCG CGTGCAGCAG
TTCCGCATGC GCCGCCTGCA GGTCCATAAC TGGGGCACGT TCAACGGCTT GACCGACGTG
CCGATCGCCG CGAAGGGCTT CTTGTTCGTC GGCCGTTCCG GTTCGGGCAA ATCCACGCTG
CTGGATGCCA TGTCCGCTCT GTTGACCCCG CCCAATCTGG TCGACTTCAA TGCCGCCGCG
CGCGAGGCCG AGCGCACTGG CCGCGATCGC AACCTGGTGT CGTATGTGCG CGGCGCCTGG
GCCGACCAGC AGGACAGCGC CTCCGGCGAA ATCGCCACGC AATATCTGCG CAAGGGCAGC
ACCTGGACCG CGCTGGTGCT GGAATACCGC AACGGCGAGG GACGGGTGAT CAGCCTGATA
CGGCTGTTCT GGATCGCCGG CAGCGGTGCG GCGGCGGCCG ACGTGCGCAA GCATTACATG
GTGGCCGAGC GCAGTTTCGA TATCGCCAGC GAATTGGTCG GCTTCGATCT GGATTTGCGC
AAGCTCAAGG CGCGTCTGGG CGACGACATC GCCCACTTCG ACAATTTCTC CGGCTATGCC
GAGCGCTTAC GCCATCAGTT GGGCATCGCC AACGAGATGG CGTTACGGCT GCTGCACAAA
ACCCAGTCCG CGAAGAATCT CGGCGATCTC AATGTGTTCC TGCGCGGCTT CATGCTCGAG
GCGCCCAAGA CCTTCGACGC CAGCGAGCGG CTGGTGGGCG ACTTCGCCGA ACTCGATGGA
GCGCATCTGG CGGTGGTCAC CGCACGGCGG CAGGTCGAAA CGCTGCTGCC GGCGCGTGCG
CATTACGAGG ACTTGCAGTC GGTGCAACGT CAGCGCGGCC GCTTGCAGGA ACTCAAGCTC
GGCCTGGACC CCTATCGCGA GCAACGCCGG CTTGCGTTGC TGGATGCGCG CCTGCATGCA
CTGGACGTCA ACGACCAGGG CCTGGCCGGC GAGGAGGGCC AACGCCGCGC TGCAGTGGAT
AACCACCAAC AACGCTTGTC CGATCTGGAG GCCCAGCGCC GCAGCCAGGG CGGCGAGCGG
ATCGACGCGC TGGAACGCGA GCAGCTCCAG GTCCAGGGCG AACTTGCACG CCGCAGCGAC
AAGCGTGCCA AGGCCGAACA GGCCTGCCGC CAGCTCGAGC AGACTTTGGC CGACAACGCG
CATGGATTTG CCGAGCAGTC CGCGCAGGCG CGCGCCGCGC TCGAGGACGG GCAGCGGCTG
GCCGCCGAAC AGGACGAGGC GATCGGCGAG CGTATCGCCG GCAAGCGCGA GGACAGCCAG
CGCTTTGCGC AGGTGCGCGC CGAGATCGAG GCGCTCACCC GCAATCCCTC CAACATTGCT
GCGCCGATGC AGGCCCTGCG TGCACGCCTG AGCGAAGAAA CCGGCATTCC CGAAGCCGCG
CTGCCCTTCG TCGGCGAACT GATCCAGGTG CGTGAGGAAG ATGCCGCCTG GCGCGGTGCC
ATCGAGCGCG TGCTGCATGG GTTTGCGCAA TCGCTGCTGG TGGACGAGCG CCATTACGCC
GAACTGGCCG AGTGGGTCAA CCGCACGCAT CTGGGCTCGC GCCTGGTCTA TTACCGGGTG
CGCAATAACG AACAGGCGTT TTCCGGCCGC GAACCCGGCA GCGCGTCGCT GCTGCACAAG
CTGCAATTGC GCGAGCATCC CTTTGCCGGC TGGCTGCGGC GCGAACTGGG CAAGCGTTTC
GACTACGACT GCCTGGAGAG CGCCAAGGCC TTGCGCACGG CAGAGCGCGC GATCACCCGC
GAAGGCCAGG TCAAGCATCC CGGCGAACGC TATGAAAAGG ACGACCGTCA TGCGGTCGGC
GACCGTCGGC GCTGGCTGCT GGGCTTCGAC AACCGCGACA AGCTGGCACT GTACGAGCGC
GAAGCCATTG AACTGGCACA ACGCATCGCC GCCTGCGATG CCGACGTGGC CGAGCTGCGT
GCGCGCCGCG AACGCGATGC CAGCCGGCGC CTGGCCCAGC ACACCCTGGC CAACCTGGCC
TGGGAGGAAA TCGACGTCGC CGCACAGCTG CAACGCCGCG ACGATATCGC CAGCGCCTTG
CGCCAGCTGC GCGAAGGCGA TGCCAACCTG CGCGCGTTGG GCGAGGCGAT CGAGCGCACG
CGCGGCGACC TGGAACAGGC CAAGCGCACG TTCGACGGTG TGCGCGAGGA ACGGATCGCG
CTGGGGGTCG AGCGCACGCG CCTGGAAAAG CAACGCCTGC ACTGCGCCGA CGCCGATGCC
CGGGTGGTCA CGCCGCTGCA GCGCGAGGGG CTGGAGGAGC GCCTGGCCAA CCTGGGCGCG
CTTAGCCTGG ACAATCTCGA AGCGCATTTT CGCCAGATCG GCAACGCCAT CGCCGAGCAG
ACCAGCGCCA GCGACAGCGA GCACAATCGG CTCGAACAGT TGCTGCTCGG CTGCTTTCGC
CGGTATAGCC AACAGTGGCC CGAAGACAGT GGCGACTTCA TCATCAGCCT GGCCGGCGCC
GAGGATTTTC TTGCCCGCCT GCAGCGTCTG GAACGCGATG GCCTGCCGCA GCACGAAGCG
CGCTTTTTCG AGCTGTTGCA GAGCCAGAGC AAGAACAATC TGCTCGCCTT GCAGCGCCAC
ACCGCCGAAG CACGCAAATC GATCGCCCAA CGCCTGGACG AGGTCAACGC CAGCCTGGAG
CAGGTGCCGT TCAACCATGG CACCTTGCTG ACCATCGAAC TCAGCGATCG GCGTTTGCCG
GAGGTGATCG ACTTCCATCA ACGTCTGCGT GATGTGCTCG GTCACCACCA GACCGACCAG
CGTGACGTGG CCGAACAGCA ATTTGCCGTG CTGCGCGAAC TGGTGCGTAA GCTCGGCTCG
GCCGATGGCG AGGACAAGCG CTGGCGCGAG CTGGTGCTGG ATGTGCGCCT GCATGTGGAG
TTCGTCGGTG TCGAGCTGGA TGCGGCCACC CGCCAGCAGG TGGAGATCTA CCGCAGCGGC
GCCGGCAAGT CCGGCGGCCA GCGGCAGAAA CTGGCAACCA CCTGCCTGGC CGCCGCGCTG
CGGTATCAAC TTGGCGGCGA AGACGGCGAA TTGCCGCGCT ACGCGGCCGT GGTACTGGAC
GAAGCCTTCG ACAAGGCCGA CAACGAATTC ACCGCCTTGG CGATGAACAT CTTCGAGAAT
TTCGGCTTCC AGATGGTGGT GGCCACGCCG CTCAAGTCGG TGATGACGCT GGAGCCGTTT
ATCGGCGGCG CCTGCTTTGT CGAAATCAGC GGCCGTCACG ACTCGGGCGT ATTGCTGATC
GAATACGACG AACAGGCACG CCGGCTCAAG TTACCCGAGC GCTCGCGCAG CGCAGCGGCC
GACGGTGCGG CGCGCGCGAC CGAGCCGTCC GCCGATGCCG TCGGCGGAGC GAGCGTCGAT
GGACTGCACT GA
|
|---|
| Protein sequence | MKSSSSSLFA DDLPEPRVQQ FRMRRLQVHN WGTFNGLTDV PIAAKGFLFV GRSGSGKSTL
LDAMSALLTP PNLVDFNAAA REAERTGRDR NLVSYVRGAW ADQQDSASGE IATQYLRKGS
TWTALVLEYR NGEGRVISLI RLFWIAGSGA AAADVRKHYM VAERSFDIAS ELVGFDLDLR
KLKARLGDDI AHFDNFSGYA ERLRHQLGIA NEMALRLLHK TQSAKNLGDL NVFLRGFMLE
APKTFDASER LVGDFAELDG AHLAVVTARR QVETLLPARA HYEDLQSVQR QRGRLQELKL
GLDPYREQRR LALLDARLHA LDVNDQGLAG EEGQRRAAVD NHQQRLSDLE AQRRSQGGER
IDALEREQLQ VQGELARRSD KRAKAEQACR QLEQTLADNA HGFAEQSAQA RAALEDGQRL
AAEQDEAIGE RIAGKREDSQ RFAQVRAEIE ALTRNPSNIA APMQALRARL SEETGIPEAA
LPFVGELIQV REEDAAWRGA IERVLHGFAQ SLLVDERHYA ELAEWVNRTH LGSRLVYYRV
RNNEQAFSGR EPGSASLLHK LQLREHPFAG WLRRELGKRF DYDCLESAKA LRTAERAITR
EGQVKHPGER YEKDDRHAVG DRRRWLLGFD NRDKLALYER EAIELAQRIA ACDADVAELR
ARRERDASRR LAQHTLANLA WEEIDVAAQL QRRDDIASAL RQLREGDANL RALGEAIERT
RGDLEQAKRT FDGVREERIA LGVERTRLEK QRLHCADADA RVVTPLQREG LEERLANLGA
LSLDNLEAHF RQIGNAIAEQ TSASDSEHNR LEQLLLGCFR RYSQQWPEDS GDFIISLAGA
EDFLARLQRL ERDGLPQHEA RFFELLQSQS KNNLLALQRH TAEARKSIAQ RLDEVNASLE
QVPFNHGTLL TIELSDRRLP EVIDFHQRLR DVLGHHQTDQ RDVAEQQFAV LRELVRKLGS
ADGEDKRWRE LVLDVRLHVE FVGVELDAAT RQQVEIYRSG AGKSGGQRQK LATTCLAAAL
RYQLGGEDGE LPRYAAVVLD EAFDKADNEF TALAMNIFEN FGFQMVVATP LKSVMTLEPF
IGGACFVEIS GRHDSGVLLI EYDEQARRLK LPERSRSAAA DGAARATEPS ADAVGGASVD
GLH
|
|---|
| |