Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03371 |
Symbol | glgX |
ID | 6303636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 109700 |
End bp | 111862 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642637430 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_001911315 |
Protein GI | 188574386 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.13804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACTC GCAAGTTCAC TCAGCGCTCG CGCATTCGCG AAGGCCGTCC CAACTCGCTC GGTGCCACCT GGGACGGGCT AGGCGTCAAC TTTGCACTGT ATTCGCGCAA TGCCACCCGC GTGGAGCTAT GTCTGTTCGA CGACCGTGGC CGCGAGCAAG AGCGCATCGC GCTCCCCGAA TATACCGACG AGGTCTGGCA CGGCTATCTG CCCGACGCAC GTCCCGGCCA GTTGTATGGC TATCGCGTGC ATGGGCCGTA TGCGCCCGAC GCCGGTCACC GCTTCAACCA CAATAAATTG CTGCTGGACC CGTACGCTAA ACAGATCGTT GGCGAACTCA AATGGGCGCC GCATCTATTC GGTTACATCA TCGGCCATCG CGACAAGGAC CTGAGCTTCG ACCGCCGCGA CAGCGCCGCG TTCATGCCCA AATCCGCGGT GATCGACCCC GCTTTCACCT GGGGCCAGGA CCGCCCGCCG CAAACGCCCT GGAACCGCAC GGTGATCTAC GAGGCGCACG TGCGCGGCCT GAGCATGCTG CATCCGGCAG TGCCGCCGGA AGAGCGCGGC ACGTTCTCGG CGCTGAAGAC CGATGAGTTA ATCGACCACA TCAGCTCGCT CGGCGTCACC GCAGTGGAAC TGCTGCCGGT GCACGCGTTC GTCGACGACC AATATCTGCT GGAAAACGGC CTGCGCAATT ACTGGGGCTA CAACACGCTG GGCTTCTTTG CGCCGCAAGC GCGTTACATG TCCACGCGCA CCGTGGCCGA GTTTAAGCAG ATGGTCGCGC GGTTGCATCA CGCCGGCCTG GAAGTGCTGC TGGACGTGGT CTACAACCAC ACTGCCGAAG GCAACGAGCT CGGCCCCACG CTTTCCTTCA AGGGGATCGA CAACGCCAGC TATTACCGCC TGGCCGACGA TCGCCGCTTC TACATCAACG ACACCGGCAC CGGTAACACC TTCGATCTCA CCAATGTCGG CGCGCTGCGC ATGGTGATGG ATTCGCTGCG GTACTGGGTG CAGGAAATGC ACGTGGACGG CTTCCGTTTC GATCTGGCCA GCATCCTCGG CCGCGAGCGC TACGGCTTCG ATCCCTCCGG CAGTTTTCTG GATGCGGTAC GCCAGGACCC GGTGCTCAGT CAGACCAAGT TGATCGCCGA GCCGTGGGAT ATCGGCCCCG GTGGCTATCA GGTGGGCAAT TTCCCGCCCG GCTGGGTGGA ATGGAACGAC AAGTTTCGCG ACAACGTGCG GGCGTTCTGG CGCGGCGACG GCGGCCAGCT GGCCGAGCTG GCCACGCGCC TCACCGGCTC TGCGGATCTG TTCAATCACA GTGGCCGCCG GCCGACCGCG TCGGTCAATT TCGTTACCGC GCACGACGGC TTCACCCTGC GCGATCTGGT CAGCTACGAA GGCAAGCACA ACCTCGCCAA CGGCGAAGAT GGCAGAGACG GCAGCGACCA CAACATCTCG TGCAATTACG GCGTCGAAGG CGAGACCAAC GACCCGACCA TCAAGCAGCT GCGTCGCCAG CAGATGCGCA ATCTGCTCGC CACCTTGCTG CTATCGCAGG GCACGCCCAT GCTGCTGGCC GGCGACGAAT TCGGCCATAG CCAGAACGGC AACAACAACG CGTACTGCCA GGACAACGAG CTGACCTGGA TCGACTGGAC CGCCGCCACC AAGGCTGCCG CCGCCGACCA GGCTGCCTTC GTGCGCCGAT TGATCCGCAT CCGCCAGCGC TACCCGTTAC TGCATCGCGC GCGTTTTTTC GATGGCAAGT TCGACGAAGC GCTGGGCCTG AAGGATCTCA CCTGGTTGGC GCCGGATGGC CACGAAATGG ACGAAGCCGG CTGGCACGAT CCGGAAGCAC GCGCGTTGAT GCTGCGCCTG GACGGCCGCT CACCGGCCAC CGGCCTGCGT GAGATCGCTG CCAATGTGAC GCTGCTGATG TTGATCAATG CCGCTTCCAC CAGCGTGTCG TTCACGCTGC CGGCGATGCA CGACGAACAC TGGCGCGTGC TGGTGGACAC CGCACGCCAC GGCGGACGCG TGGTCGCCGG CGGTAGCGAA TGGAAGGCAT CGGCGCATTC GTTGACGTTA TTGGCGGTGG AACGCGACCG CATCATCAGC AGTGCGCGCA TCGTCTCCGA AGGCGCACGT TGA
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Protein sequence | MATRKFTQRS RIREGRPNSL GATWDGLGVN FALYSRNATR VELCLFDDRG REQERIALPE YTDEVWHGYL PDARPGQLYG YRVHGPYAPD AGHRFNHNKL LLDPYAKQIV GELKWAPHLF GYIIGHRDKD LSFDRRDSAA FMPKSAVIDP AFTWGQDRPP QTPWNRTVIY EAHVRGLSML HPAVPPEERG TFSALKTDEL IDHISSLGVT AVELLPVHAF VDDQYLLENG LRNYWGYNTL GFFAPQARYM STRTVAEFKQ MVARLHHAGL EVLLDVVYNH TAEGNELGPT LSFKGIDNAS YYRLADDRRF YINDTGTGNT FDLTNVGALR MVMDSLRYWV QEMHVDGFRF DLASILGRER YGFDPSGSFL DAVRQDPVLS QTKLIAEPWD IGPGGYQVGN FPPGWVEWND KFRDNVRAFW RGDGGQLAEL ATRLTGSADL FNHSGRRPTA SVNFVTAHDG FTLRDLVSYE GKHNLANGED GRDGSDHNIS CNYGVEGETN DPTIKQLRRQ QMRNLLATLL LSQGTPMLLA GDEFGHSQNG NNNAYCQDNE LTWIDWTAAT KAAAADQAAF VRRLIRIRQR YPLLHRARFF DGKFDEALGL KDLTWLAPDG HEMDEAGWHD PEARALMLRL DGRSPATGLR EIAANVTLLM LINAASTSVS FTLPAMHDEH WRVLVDTARH GGRVVAGGSE WKASAHSLTL LAVERDRIIS SARIVSEGAR
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