Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03059 |
Symbol | |
ID | 6308127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4731338 |
End bp | 4733200 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642641853 |
Product | protease |
Protein accession | YP_001915690 |
Protein GI | 188578761 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTCGCCA CTGCCCCCTT CCAACTGCAT GCGGCCAACG ATCCGCTGGA ACAACGTGGT CTGGTCGACA GCCCGGCGCC TGACGGCTCG CCCGCGGCCG GCAGGCTCAT CGTCAAATAC AGGCCCAGCA TCGGCTCCGA CGCGCTGCGC GCGTCCATCC TGTCGTCGGC CGCACGCCGC GCCAACCTGT TGCCTTCCTG CAGCAACGCC GCCCGTAGCG CGCCGATGGC CGCGCGCGTC CTGCGCACCA CCGGCACCGG TGCCAGCGTG CTGCGCCTGA CCGGCCATCT GACTGCTGCC GAGCAAACCA GGCTGCTGAC CGAACTGCGC GCCGACCCGG CCGTCGAATA CGCGCAATTG GATCGGATGA TGCAGCCGGT GCTCGACCTG GTCGGGTCGG CCGCACTGCC GGCACAGGCG CGTGCAACAG CGCAGCACAC CGATCCGGCA GTGCCCAACG ACAAGTTCTA CGCGAAATAT CAATGGCATA TGCAGGACAG CGCGGGCGGG ATCCGCGCGC CCAAGGCCTG GGAGACCTCC ACCGGCGGCG GCGTGGTGGT GGCGGTGATC GACACAGGCA TCCTGCCCGA CCACCCGGAT CTGAAGAACA ACGACCACAT CCTGCAGGGC TACGACTTCA TCACCAACGC AAGTGTGTCC CGTCGCACCA CCGACGGCCG CGTACCCGGC GCGCTCGACT ACGGCGATTG GATAGACGAC GACAATACCT GCCTGCAGCG CGCGCGCGCC AGTAGCTGGC ACGGCACCCA CACGGCCGGC ACGATCGGCG AACTGACCAA CAACGCGATT GGCGGCGTTG GCGCCGCACA CGACGCCCAG ATCCTGCCGA TCCGCGCGCT CGGGCACTGC GGCGGCATGA GTTCGGATAT CGCCGATGCG ATCGTGTGGG CATCGGGCGG GCACGTCGAT GGCGTGCCGG ACAATACCCA TCCGGCCGAA GTGATCAACA TGAGTCTGAG CGGACCCGGC AGCTGCGACA GCAATACGCA GCAGGCGATC AATACGGCCG TCGCCAACGG CAGCACGGTG GTGGTGGCCG CCGGCAACGA TGCCATCGAT GCGGCGCAAT TCACCCCGGC CAGCTGCAGC AACGTGATCA CCGTGGGTGC CACCCGCATC ACCGGCGGCA TCGCGTTCTA TTCCAACTTC GGCTCGGTCG TCGACCTGTC AGGACCCGGC GGCGGCCAGG ACCAGGACAC CGGTAACGGC GGTTGGGACG GGTTGGTGCT GTCGACCGGC TATAGCGGCA AGACCACGCC GACCTCCGGT CAATATAAGT ACCTCGGCTA TGCCGGCACC TCGATGGCCT CGCCGCACGT CGCGGCCGTG GCTGCGTTGG TGCAAAGCGC GCTGGCGAGC ACTGGCAAGA CACCGCTCAA CCCATCGCAA CTGCAGGCGG TCTTGAAACA GACCGCGCGC GCCTTCCCGG TGCCACCGCC GACGGCGACA CCGATCGGTA CCGGCATCGT TGATGCGACG GCGGCGATGG ACTATGTCCG CACCAATTGC AGCGGCAGCA GCTGCAAGCC GGTGAGCACC GCACTGAGCA ACCGCACGCC GGTCACCGCG CAAAGTGCCG GCGTCGACGA GGAGCATTTG TATAGCTTCA CCGCCACCGC GGGGACGCCG TTGAACGTGC TGTCCTACGG CGGCAGCGGC AATGTCGCCC TGTACCTGAC GTTCGGCGCC GAGCCCACCA CCCGTAGCTA CGACCTGCGT TCGGTCCGTC CCGGCAATAC GCAGACCCTG CGACTGCCCT CGCCACAGGC CGGCACCTAC TTCATCAAGC TGGTCGGCGG AGACGGTGGT TTCAACAATG TGTCCTTGAT GGCCCGGCAG TGA
|
Protein sequence | MLATAPFQLH AANDPLEQRG LVDSPAPDGS PAAGRLIVKY RPSIGSDALR ASILSSAARR ANLLPSCSNA ARSAPMAARV LRTTGTGASV LRLTGHLTAA EQTRLLTELR ADPAVEYAQL DRMMQPVLDL VGSAALPAQA RATAQHTDPA VPNDKFYAKY QWHMQDSAGG IRAPKAWETS TGGGVVVAVI DTGILPDHPD LKNNDHILQG YDFITNASVS RRTTDGRVPG ALDYGDWIDD DNTCLQRARA SSWHGTHTAG TIGELTNNAI GGVGAAHDAQ ILPIRALGHC GGMSSDIADA IVWASGGHVD GVPDNTHPAE VINMSLSGPG SCDSNTQQAI NTAVANGSTV VVAAGNDAID AAQFTPASCS NVITVGATRI TGGIAFYSNF GSVVDLSGPG GGQDQDTGNG GWDGLVLSTG YSGKTTPTSG QYKYLGYAGT SMASPHVAAV AALVQSALAS TGKTPLNPSQ LQAVLKQTAR AFPVPPPTAT PIGTGIVDAT AAMDYVRTNC SGSSCKPVST ALSNRTPVTA QSAGVDEEHL YSFTATAGTP LNVLSYGGSG NVALYLTFGA EPTTRSYDLR SVRPGNTQTL RLPSPQAGTY FIKLVGGDGG FNNVSLMARQ
|
| |