Gene PXO_02910 details

Gene Information

• Locus tag: PXO_02910
• Symbol: pcaC
• ID: 6308282
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 4891377
• End bp: 4891790
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642642006
• Product: 4-carboxymuconolactone decarboxylase
• Protein accession: YP_001915838
• Protein GI: 188578909
• COG category: [S] Function unknown
• COG ID: [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain; [TIGR02425] 4-carboxymuconolactone decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGAAG ACGAACGTTA TCAAGCCGGC ATGCGTGAGC GCCGGCGCCT CCTGGGCGAT 
GCGCATGTCG ACCGCGCGCT GGCTGCGCGT AGCGACTTCA CCGAAGAATT CCAGGACCTG 
ATCACCCGCT ACGCCTGGGG CAGCATCTGT ACCCGCGACG GCCTGCCGGC GCACACGCGC 
TCGCTGCTCA CCTTGGCGAT GATGGTCGCG CTGGGCCACG ACGAAGAATT CAAACTGCAC 
GTGCGTGCAG CGCGCAACAA CGGCGTGACG CCTGCGCAGA TCAAGGAAGT GCTGCTGCAA 
GCGGCAATCT ACTGCGGCGT GCCGGCTGCC AATCACGCCT TTGCGCTGGC CAGGCCGATT 
CTGGAAGAAC AAGCTGCCGA GGCCGGCGCA GCGCCAGCGG CGTCACCCGG ATAA 

 

Protein sequence

MHEDERYQAG MRERRRLLGD AHVDRALAAR SDFTEEFQDL ITRYAWGSIC TRDGLPAHTR 
SLLTLAMMVA LGHDEEFKLH VRAARNNGVT PAQIKEVLLQ AAIYCGVPAA NHAFALARPI 
LEEQAAEAGA APAASPG