| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02842 |
|---|
| Symbol | |
|---|
| ID | 6308353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4959405 |
|---|
| End bp | 4960421 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642642076 |
|---|
| Product | biotin--protein ligase |
|---|
| Protein accession | YP_001915906 |
|---|
| Protein GI | 188578977 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCGC CCGCGCATTT GTCCGCTCAT GCCTTCTCGC GCACCGCAGC CGTGGATGAT
CGCGCCTTGC TGGCCAAACT CGCCAGTGGC AGGCTGTCCG GCGATGCGCT GGCACGCGAT
GCCGGCTTGA CCCGTGCGGC GGTGTGGAAG CGCATCCAGA ATCTGCGTGC GGCCGGGGTC
GACATCGAAG GGCGAGCCGG CGACGGTTAC CGCCTGGCCA CGCCCTTGGA CCTGCTGGAT
GCGGCGTGCA TTCGCGCCGG CATGGCACCG GATGCGGCCG CTGGCCTCGC TGCGCTGGAC
GTGGCCTGGA CGCTGGAATC CAGCAACACC ACCTTGCTGG CGCAGTCGGC GCCCGAACAG
GGCGTGGCAG TGCTGCTGGC CGAGCGCCAG ACCGGTGGCC GCGGTCGGCG CGGTCGGCAA
TGGACCTCGC CGCTGGGCGC GCATATCTAC TTGTCGGCGT CGCGCCGTTT CAGTGGCGGG
CTGGGCCAGT TGGCCGGGCT CAGCCTGGCC GTGGGCGTGG CAGTGGCCGA AGCCCTGCGT
GGTTGCGGGT TTGCCGATGT CGGTCTGAAA TGGCCCAACG ATCTGCTGGC ACGCGAGCGC
AAGTTGGGCG GCCTGTTGAT CGAGGGCGGC GGCGAGATGA CCGGCAACGC GCGTGCGGTG
ATCGGGCTGG GCTTGAACGT GCACATGCCG GCGGCGGCAG CGGCCAGCAT CGACCAGCCG
TGGATCGATC TGGATACCTT GGCCGGCCGA CCGGTGTCAC GCGACCAAGT GGTGGCGGCG
GTGCTGTCCG CTTTGCTGCC GGCGCTGGAT CTGTTCGAGG CGCAGGGGCT GGTGCCGTTC
CTGGGGCGCT ATGCAGACCT GGACGTCCTG AGCGGGCGTG CGGTGCAGGT CGAAGAGGCC
GGCACCCGAC ATCGTGGCGT TGCGCTCGGC CTGGCGGCCG ACGGCGCGTT GCGGGTGCGA
CTGGGCGACA CGGTGCGTCT GTTCCACTGC GGAGAAGTGA GCGTGAGACC TGCATGA
|
|---|
| Protein sequence | MPPPAHLSAH AFSRTAAVDD RALLAKLASG RLSGDALARD AGLTRAAVWK RIQNLRAAGV
DIEGRAGDGY RLATPLDLLD AACIRAGMAP DAAAGLAALD VAWTLESSNT TLLAQSAPEQ
GVAVLLAERQ TGGRGRRGRQ WTSPLGAHIY LSASRRFSGG LGQLAGLSLA VGVAVAEALR
GCGFADVGLK WPNDLLARER KLGGLLIEGG GEMTGNARAV IGLGLNVHMP AAAAASIDQP
WIDLDTLAGR PVSRDQVVAA VLSALLPALD LFEAQGLVPF LGRYADLDVL SGRAVQVEEA
GTRHRGVALG LAADGALRVR LGDTVRLFHC GEVSVRPA
|
|---|
| |