Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02758 |
Symbol | |
ID | 6308438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 5039191 |
End bp | 5040780 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642642157 |
Product | ISXoo5 transposase |
Protein accession | YP_001915987 |
Protein GI | 188579058 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCACA CCCAGAACGC CGACTTCTTC CGGCAGCCCT TGGCCGAGAT GATCGATCCG CGCCACCCGC TGGCGGTGCT GGCCCGTCGG CTGCCCTGGG CGCAGATCGA GGCGGTGTTG GCGCCGCATT TCGCTCGCAA GGTGCGCGCA GGTCGCGCGG TGGCGCAACA CGATCTGTTC GGCCCCTCGG TGCAAGTGGC CGGTGCCGGT ATTGCCGCTG CCGGCCGCCC ACGCCTTCCC ATTCGCTTGA TGGCCAGCCT GTTGGACCTG AAGCACGCTT ACAAGCTCAG CGACGAGGAA CTGGTGGAGC GCTGGGCCGA GAACGTGGTC TGGCAGCACT TCAGCGGCAT GGCGTTCTAT GAGCCGCGCC TGCCCTGCGA TGCCACGCAG GTCGGGCGTT TTCGCGCGGC CATCGGTGAG GCCGGGGTCG AGGAACTGCT CAAGGCCACC ATCGACACCG CGGTGTCCTC CAAGGCCATC GTGCCCGCCG AGTTCGAACG GCTGATCGTG GACACCATCG TGCAGGAGAA GGCCATTGCT CATCCGGTGG ATTGGCGCCT GATGGAGAAC GCGCGGCACA AGCTGGTGGT GGCGGCCAAG CGCGCGGGCA TCGCGCTCAA GCAGACCTTC GCCAAAGAAA CCAAGACGCT GCGGCGCAAA GCCGGCGGCT ACGCCCATGC CAGGCAGTTC AAGCGCCTGC GCAAGGTCCT CAAACGCCAG CGCACGCTCC TGGGCATCGT ACTGCGCGAG GTGCAGCGCA AGATCGGGCA AGCCAGCCAG GCCACGGCGC CGGCGCTGGA GAATCTGCAC ACGCTGATGC AGCGCGCCGA GCGCATCCAT GCTCAGCAAC CCAATGGCAA GAACAAACTC GATGCCCTGC ACGCGCCCGA AGTGGAGTGC ATCGGCAAGG GCAAGGCGCG CAAGCCCTAC GAGTTCGGGG TGAAGGTCAG CGTGGCCATC ACGCACAAAC AGGGCCTGAT GGTCGGCGCG CGCAGCTTCA CCGGTACCCC CTATGACGGC CACACGTTGC ACGAGCAACT GGAGCAGGCC CGGATCCTGA GCGAGGACAC AGCAGGCGCA CCTAAACAGG TGGTGGTGGA CCTGGGCTTT CGCGGTGTGG ATGCGGCCAA TCCCGGCGTT GAGATCATCC ACCGGGGCAC GTTCAAACGC CTGACAGATG AGCAGCGCCG CTGGCTGAAG CGACGCCAGG CGGTGGAGCC GGCCATCGGA CACTTGAAGC ACGACAACGG CATGGATCGG TGCTGGTTGC AAGGAGCGAA CGGCGATGCG CTGCACGCAG TGCTGTGCGC GGCGGGGGAC AACATCCGCC GGTTGCTGCG GGCCATGGTG CGTCTGGGAC TGAAGGGTCT TTTTGCGCCT ATGGTTGCGA GACTCATCAT GCTGGCCACA GTGCTCGCAA TGTCATTGCG AGCGAGGAAC ACACGCCCAC ATCGGTTGGC GTGGTGTGTT TGGTCAATTT TGCAGGGGCG ACGAAGTAGC CCCTTGCCCC AAAGTGCTGA CCGACAAAAT TCCGCTTGCG CTCTGCATAT ATCCGAGCAA GATGAATGGC GCTTTTGCCT TCCTGATTAG
|
Protein sequence | MAHTQNADFF RQPLAEMIDP RHPLAVLARR LPWAQIEAVL APHFARKVRA GRAVAQHDLF GPSVQVAGAG IAAAGRPRLP IRLMASLLDL KHAYKLSDEE LVERWAENVV WQHFSGMAFY EPRLPCDATQ VGRFRAAIGE AGVEELLKAT IDTAVSSKAI VPAEFERLIV DTIVQEKAIA HPVDWRLMEN ARHKLVVAAK RAGIALKQTF AKETKTLRRK AGGYAHARQF KRLRKVLKRQ RTLLGIVLRE VQRKIGQASQ ATAPALENLH TLMQRAERIH AQQPNGKNKL DALHAPEVEC IGKGKARKPY EFGVKVSVAI THKQGLMVGA RSFTGTPYDG HTLHEQLEQA RILSEDTAGA PKQVVVDLGF RGVDAANPGV EIIHRGTFKR LTDEQRRWLK RRQAVEPAIG HLKHDNGMDR CWLQGANGDA LHAVLCAAGD NIRRLLRAMV RLGLKGLFAP MVARLIMLAT VLAMSLRARN TRPHRLAWCV WSILQGRRSS PLPQSADRQN SACALHISEQ DEWRFCLPD
|
| |