| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02662 |
|---|
| Symbol | |
|---|
| ID | 6307970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4581445 |
|---|
| End bp | 4582551 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642641698 |
|---|
| Product | putative permease, YjgP/YjgQ family |
|---|
| Protein accession | YP_001915535 |
|---|
| Protein GI | 188578606 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGA CGCCGCGGGT CCATGATTGG TATGTCGGCC GGGTGGTGCT GTCCACCGTG
CTGCTGACGT GGGCGGTGCT GTTGGGGCTT GACCTGGTCA ACGCCTTTGC CAGCGAAGCC
AAGGACATTG GTCAGGGCAG TTACACCTTT GGCCATGCGG TGGCTTACGT GGCCTACACC
GTGCCGCGCC GGGCCTACAC CTTGTTCCCC ACTGCAGCGG TGATTGGCGC GCTGATGGGC
CTGGGCCAGT TGGCCGCCAC CTCCGAGCTG ACCGCGCTGC GCGCGTTGGG CGTGTCGCGC
AAACGCATGT CCGCCTCGGT AGTCGCAGCG ATGGCGCTGC TGACCGCCAG CATGGTGATC
AGTGGCGAAA CCATCGGGCC GTGGGCACAG AACCAGGCGG ACACGCTCAA GGCCAGTGCC
CGCTACAACA GCGATATGGC CGCTTCGCTC TATGCCGGCC TGTGGGCACG TGAGGGCGAC
ACCTTTCTTA ACGCCTTGAG TGGTGAAGAG AAGTTGCTCG ACGGCGGCGA TACCGCACTG
GATCTGCACG ATGTGCGGCT GTATCACCTC GACTCCAGCG GCAGAATGCA GCAGCTGACC
TATGCGTCGG TGGCCGAACA TCGCGATGGC CGTTGGACTC TGCGCCAGGT ACGTCGCGAC
ACCTTCCAGG AACGCTCGGT GCAGCGCGAA ACCTTCCCCG AGTTGCCGTG GCAATCGCAA
CTGAATCCGG CAGCGCTGGC CGCTGGCCTC GCCAAGCCGC GCAATCTGTC CGCTCATGAT
CTGGAGCAGA GCATCGAATA CCGCAGCCGC AATGGATTGG ATGCGCGCGA TTACGAAGAT
CAGTACTGGA GCCGTTGGTT CTATCCGCTC AACGTGCTGG CGCTGTGCAT GGCGGCAATC
CCGTTCTCGT TCGGTTCGCT GCGGAGCGGC GGCTTGGGCA AGCGTCTGTT CCTGGGCATC
CTGTTCGCGC TGGGCTTCTG GCTGCTGCAG CTGTTTTTCG GCCGCATGGC CGGCGCGCTC
AAGCTCGATT ACCGCATCGC CTATGCGCTA CCGCCGATGG TGATGCTGGG TGTATCGGCG
TGGTTGTTCC GCAGGCGTAG TAGCTGA
|
|---|
| Protein sequence | MKLTPRVHDW YVGRVVLSTV LLTWAVLLGL DLVNAFASEA KDIGQGSYTF GHAVAYVAYT
VPRRAYTLFP TAAVIGALMG LGQLAATSEL TALRALGVSR KRMSASVVAA MALLTASMVI
SGETIGPWAQ NQADTLKASA RYNSDMAASL YAGLWAREGD TFLNALSGEE KLLDGGDTAL
DLHDVRLYHL DSSGRMQQLT YASVAEHRDG RWTLRQVRRD TFQERSVQRE TFPELPWQSQ
LNPAALAAGL AKPRNLSAHD LEQSIEYRSR NGLDARDYED QYWSRWFYPL NVLALCMAAI
PFSFGSLRSG GLGKRLFLGI LFALGFWLLQ LFFGRMAGAL KLDYRIAYAL PPMVMLGVSA
WLFRRRSS
|
|---|
| |