Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02468 |
Symbol | dnaQ |
ID | 6307707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4318888 |
End bp | 4319622 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642641444 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_001915290 |
Protein GI | 188578361 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.650155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCAGA TCATTCTCGA TACCGAAACC ACCGGCCTGG AATGGCGTAA GGGCAACCGC GTCGTCGAAA TCGGTGCGGT GGAGCTGCTG GAGCGGCGCC CGAGCGGCAA CAATTTCCAT CGCTATCTGA AGCCCGATTG CGACTTCGAG CCCGGCGCGC AGGAAGTGAC CGGGCTGACC CTGGAATTTC TGGCCGATAA ACCGTTATTC GGCGATGTGG TGGAGGAGTT TCTCGCCTAC ATCGACGGCG CGGAACTGAT TATCCATAAC GCCGCGTTCG ACCTGGGGTT TCTGGACAAC GAACTGGCGC TCCTGGGCGA TCACTACGGT CGCATCGTCG AGCGCGCCAC AGTGGTGGAT ACCTTGATGA TGGCGCGCGA GCGCTATCCG GGGCAACGAA ATTCCTTGGA TGCCTTGTGC AAGCGTCTGG GCGTGGACAA CTCGCATCGC CAGTTGCACG GCGCATTGCT CGATGCGCAG ATCCTGGCCG ACGTGTATAT CGCGCTGACC TCGGGTCAGG AGGAAATCGG GTTCGCCAGC GCCGACGCAG GCCAGCAGAC CGACGCAGCG AGCGGCATGA TCGCGTTCGA CCCGGCGCTG CTGTTGCCGC GTCCGCGCGT TGCGGTGACC GCCTCCGAAT CGCAGGCGCA CGAGGCCCGT CTGGTGCAGC TGCGTAAAAA GGCCGGGCGT GCATTGTGGG ATCCGCCGGT CGAAGAGGTC GCTGTTGCTG GCTGA
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Protein sequence | MRQIILDTET TGLEWRKGNR VVEIGAVELL ERRPSGNNFH RYLKPDCDFE PGAQEVTGLT LEFLADKPLF GDVVEEFLAY IDGAELIIHN AAFDLGFLDN ELALLGDHYG RIVERATVVD TLMMARERYP GQRNSLDALC KRLGVDNSHR QLHGALLDAQ ILADVYIALT SGQEEIGFAS ADAGQQTDAA SGMIAFDPAL LLPRPRVAVT ASESQAHEAR LVQLRKKAGR ALWDPPVEEV AVAG
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