Gene PXO_02388 details

Gene Information

• Locus tag: PXO_02388
• Symbol: thiE
• ID: 6307625
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4233782
• End bp: 4234405
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642641363
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_001915211
• Protein GI: 188578282
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.2838
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAACC GCCTGAACGT CCGCGGTGTG TACCTGATCA CCCCCGACGA GCCCAACACG 
CAGCGCTTGC TTCTGCGCAC GACGCCATTG CTGGCGTCGA TCGCCTGGTT GCAATACCGC 
AACAAGCAGG CGGACGCGGC GCTGCGGCTG CGTCAGGCCA GCGCCTTGCG CGAGGCGTGC 
GTGGCGCACG GTGTGCCATT GATCATCAAC GACGATGCGC AACTGGCAGC GCAGGTCGGT 
GCGCAAGGCG TGCATCTGGG CGAAGACGAC GGCGAAGTGA CCGCAGCGCG TGCGCTGCTG 
GGCGAGCATG CCATCATCGG GGTGTCGTGC TACGACGCGA TCGGACGCGC GCGCGCAGCC 
GCCGCAGCCG GCGCCAGCTA TGTGGCCTTC GGTGCGTTTT TCCCCACCAT CACCAAGCAG 
ACCACCCGGC GCGCGACGCC TGCGTTGCTG GAGCAGGCCG CCGAACTGCA CCTGGCGCGC 
GTGGCGATCG GTGGCATTGC GCCGGCGCAG GTGCCTGCGC TGGTGACTGC GGGTGCCGAT 
TTGATTGCCG TGGTCAGTGG CGTGTATGCG GCGCCGGATC CGGTTGCTGC AGTGCAGGCG 
TATCGTGCGG GGTTTGCGGC TTAG 

 

Protein sequence

MPNRLNVRGV YLITPDEPNT QRLLLRTTPL LASIAWLQYR NKQADAALRL RQASALREAC 
VAHGVPLIIN DDAQLAAQVG AQGVHLGEDD GEVTAARALL GEHAIIGVSC YDAIGRARAA 
AAAGASYVAF GAFFPTITKQ TTRRATPALL EQAAELHLAR VAIGGIAPAQ VPALVTAGAD 
LIAVVSGVYA APDPVAAVQA YRAGFAA