| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02356 |
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| Symbol | |
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| ID | 6307594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4203854 |
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| End bp | 4206283 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642641332 |
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| Product | penicillin-binding protein 1A (PBP-1a) (PBP1a) |
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| Protein accession | YP_001915180 |
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| Protein GI | 188578251 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.448545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGTA TTCGCCGTTG GCTGGGCTGG ATCCTGGCCA CGATCGTCGT GCTCGCACTG
CTTGGCGCTA TTGCTGCCGG CGGCCTGTAT TACGCTATTT CCTCGAAGTT GCCGGACGTG
CAGTCGCTCA AGCAGGTAGA GCTGCAAGAG CCCATGTATG TCTATTCCAG CGACGGCCGC
CTGATGGCCG TCTATGGCGA GACCCGGCGC TACCCCATCC AGATGAAGGA CGTGCCGCTG
CGCTTGAAGC AGGCCTTCCT AGCCACCGAG GACGCCCGCT TCTACGAGCA CGGCGGCGTG
GACTACAAGG GCATTGCCCG CGCGGTGTGG CTGCTGACCA CCACCGATGC CAAGCGCGTG
CCGGGTGGGT CGACCATCAC CCAGCAGGTG GCGCGGCAGT TCTTCCTGAG TTCCGAATAC
AGCTACACCC GCAAATTGGC GGAGATCCTG CTGGCGCGCA AGATCGAGAG TGAGCTGAGC
AAGGACGAGA TTTTCGAGCT GTATCTCAAC AAGAGTTTCT TCGGGAACCG CGCCTACGGC
GTCGGTGCCG CGGCCGAGTA CTACTACGGC AAGAAGATGA GCGAATTGAG CGTGGACGAG
ATGGCCTCGC TGGCCGGCAT CCCCAAGTTC CCATCCAGCG GCAACCCGAT CAGCAACCCT
GAGCGTGCGC AGGAACGTCG CGACTATTAC GTCCTGCAGC GGATGGCAGA CCTGGGCTTT
ATCAGTCAGG CCGAAGCCGA TGCTGCCAAG GCGGTGCCGA TGCATGCAAA GCCGCACGAG
CCGCCCGTGG AGGTGTACGC CCCTTACGTG GCCGAGTTGG TGCGCCAGGA AATGATCGCC
AAGTACGGTG GCGATGTGCT CAACAAGGGC TACCACGTCA CCACGACCAT CGATGCGACC
TTGCAGACCG GCGCGGATGT GGCGATCGCC GACGGCTTGC GCGTTTACGA TCATCGCCAT
GGCTGGCACG GCGTGGAGCA GCACTTCGAC GTGGCCGCCG ATGCGGACGC GCCGGCACTG
GCCAAGCATC TGGCGGGTGC GTTCACCCAG GGCGGCCTGC GTGCGGTGAT CGTGGCGCGC
ACCAATGCCG ATGGCGGGGT CACGGTCGTG CAGAGCGACA AGACCGAACT GACCCTGCCG
GCCAGCGCCA GCCGCTGGAC CGGCAAGACC CCGGCCAAGC TGCTGACCCG CGGCGACCTT
ACCCGCATCC GCACCGGCGA AAAGGAAGGC GAGTGGATCA TCGACCAGCT GCCGCGCGGG
CAGGCGGCCT TGGTCTCGCT GGACGCCAAC AACGGCGCGC TGCGCGCGCT GGTCGGCGGC
TTCAGTTTTG CAGGCAACAA GTTCAATCGT GCTACCCAGG CGCGCCGCCA GCCAGGGTCG
AGCTTCAAGC CGTTCGTGTA TGCAGCCGCC TTCGAAAAGG GCTTCAATCC GGCCTCGATC
GTGCTGGATG CACCAGTGGT GTTCCGCGAC CGGCGCGGCA AGACCTGGTC GCCGCAGAAC
GACGGCGGTG GCTTCCGTGG CCCGATGCGC CTGCGCGAGG CGCTGGTGCA ATCGCGCAAT
TTGGTATCGG TGCGCCTACT GGACGCCATC GGAGTCGATT TTGCGCGCAA ATACATCAGC
CAGTTCGGTT TTCAAGAGGC CGAGTTGCCG CCGAATCTGT CGATGTCGCT GGGTACCGCC
TCGCTGACGC CGCTGTCGGT GGCCCGCGGC TACGCGGTGT TCGCCAATGG CGGCTCGCGC
GTGGACACCT GGATTGTGGA TGAGGTCAAG GACCGTGACG GCAACATCGT CTTCAAGGAA
GTGCCCGCCG TGGCCTGCCG CACCTGCGCC CTGCAAGGTG GCAATGCGGC GCCTGTGAGC
CAGGTCGTGG ACGGCTTCAA CTTTGGTGCA CAGGCGCCGG AGACGCCGCC TGCCGCAGCA
GCCACTCCCA CCACCCCAAC GCCAGCAGAA GCTGCCCCGG CCGCAATTGC CGAAACCAAG
ATCGCGCCTC GCGCAATCGA CGAGCGCACC GCCTACCAGC TGGTATCGAT GATGCGCGAC
GTAGTCCAGC GCGGTACCGG TACCGCGGCC AAGGTACTCG ACCGCGAGGA CGTGGGCGGC
AAGACCGGCT CCACCAACGA TCACCGCGAT GCCTGGTTCT CCGGCTTTGG CGGCCCTTAC
GTCACCACCG TATGGGTGGG CCGCGACGAC TTCCGCTCGC TCGGCTATCG CGAGTACGGC
GGCAAAGCGG CGCTGCCGAT CTGGATCGAC TACATGCGGG TGGCCCTCAA GGACAAGCCG
ATTGCGGCCA ATGATCCGCC CGACGGCATG ACCCAGGCCA CCATCAATGG CGCGGTCGAA
TGGGTGAAGA ACGAGGATCT GGACCGCCTG CAGGACTACG ACTACGGCCT GCAGGAACAG
CAGGACGAGA AGGCGTTCGA TATTTTCTGA
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| Protein sequence | MPRIRRWLGW ILATIVVLAL LGAIAAGGLY YAISSKLPDV QSLKQVELQE PMYVYSSDGR
LMAVYGETRR YPIQMKDVPL RLKQAFLATE DARFYEHGGV DYKGIARAVW LLTTTDAKRV
PGGSTITQQV ARQFFLSSEY SYTRKLAEIL LARKIESELS KDEIFELYLN KSFFGNRAYG
VGAAAEYYYG KKMSELSVDE MASLAGIPKF PSSGNPISNP ERAQERRDYY VLQRMADLGF
ISQAEADAAK AVPMHAKPHE PPVEVYAPYV AELVRQEMIA KYGGDVLNKG YHVTTTIDAT
LQTGADVAIA DGLRVYDHRH GWHGVEQHFD VAADADAPAL AKHLAGAFTQ GGLRAVIVAR
TNADGGVTVV QSDKTELTLP ASASRWTGKT PAKLLTRGDL TRIRTGEKEG EWIIDQLPRG
QAALVSLDAN NGALRALVGG FSFAGNKFNR ATQARRQPGS SFKPFVYAAA FEKGFNPASI
VLDAPVVFRD RRGKTWSPQN DGGGFRGPMR LREALVQSRN LVSVRLLDAI GVDFARKYIS
QFGFQEAELP PNLSMSLGTA SLTPLSVARG YAVFANGGSR VDTWIVDEVK DRDGNIVFKE
VPAVACRTCA LQGGNAAPVS QVVDGFNFGA QAPETPPAAA ATPTTPTPAE AAPAAIAETK
IAPRAIDERT AYQLVSMMRD VVQRGTGTAA KVLDREDVGG KTGSTNDHRD AWFSGFGGPY
VTTVWVGRDD FRSLGYREYG GKAALPIWID YMRVALKDKP IAANDPPDGM TQATINGAVE
WVKNEDLDRL QDYDYGLQEQ QDEKAFDIF
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