Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02353 |
Symbol | |
ID | 6307591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4201160 |
End bp | 4201825 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642641329 |
Product | fimbrial assembly membrane protein |
Protein accession | YP_001915177 |
Protein GI | 188578248 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3167] Tfp pilus assembly protein PilO |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.658699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGA AATCATTCAA GCTCAGCGAT CTGGATTTCA ACAACATTGG CGGCTGGCCG AAGCAGGCAC GTATCGTGTT CTGCGTAGTG GTCGGCCTGT TCATCATGGT GCTGGCCTGG TTTCTGTTGA TCAGCAGCAA ACGCGATGAA CTCGAAGGCC TGGAAGGCAC CGAATCCCAA CTGCGCACCG AGTTCGAGAC CCAGCAGGGC CGCGCGGTGA ATCTGGAGCC GCTCAAGCAG CAGCTCGCGC AGATGGAGCA GGTGCTGCAG CAGATGCTGC GTCAGCTTCC CAGCAAGACC GAAATGCCGG ATCTGATCAT CGATGTTTCG CAGACAGCGT TGTCCAGCGG CCTGTCCAAT GAGCTGTTCC AGCCTGGTCC TGAATCGCCG AAGGAGTTCT ACGCCGAGAA GCCGATCGCT CTGCGCATGG TGGGCAGCTA CCACCAGTTC GGTGCCTTCG TCAGCGGTGT GGCCTCGCTG CCGCGCGTGG TGATCCTGAC CATGCACGAC ATCAACCTCA AGCCCAAGGA TCCCAAGGCC GGTATCGGCG CGCGCGGCGC GCTGGAACTG TCCGGCACGG TCAAGACCTA TCGTTATCTT GACGATGAGG AAATGGCCGA GCAGGAAAAG GCTGCAGCCA ACGCTGCGAA GAAGGGCGGC CAATGA
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Protein sequence | MSQKSFKLSD LDFNNIGGWP KQARIVFCVV VGLFIMVLAW FLLISSKRDE LEGLEGTESQ LRTEFETQQG RAVNLEPLKQ QLAQMEQVLQ QMLRQLPSKT EMPDLIIDVS QTALSSGLSN ELFQPGPESP KEFYAEKPIA LRMVGSYHQF GAFVSGVASL PRVVILTMHD INLKPKDPKA GIGARGALEL SGTVKTYRYL DDEEMAEQEK AAANAAKKGG Q
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