| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02343 |
|---|
| Symbol | |
|---|
| ID | 6307581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4189832 |
|---|
| End bp | 4191589 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642641319 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001915167 |
|---|
| Protein GI | 188578238 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCA GACACCATTT GCGTCGCGCG GCGATCGGCA TGCTGGCCAG CCTGGCACTG
TTGGTGTGCG CACCGGCGGG TGCGGTCACG CGCGCGTGGC TGGATCGCGA CAGCGTCAAT
GTCGGCGATG TGGCGATGTT GAATATCGAA ACCGACCAAC GCGGCGTCGA CCCGGATTAC
ACACCACTGC GCAGCGATTT TTCGCTAGGC GCCAAGAGCG CCAATCAGCA GATGCAGGTG
ACCAATGGTT CGGTGACGGT ACGTGCCTTG TTTGGCGTGG TGCTGGCACC GCGCAAGAGT
GGTGAACTGA TCGTACCGGC GATCCGCGTG GGCAACGAGC GCACCGAGCC GCTGCGTTTG
CAGGTGGTTG GGGCGGCGAA CGATCCCTCC GGCAGTTCGG GCAGGGCTGC CGACGCGCCG
AATGCGGCGC AGGGCAATGA AGAGGCCTTC GTCGAAACCC GGGTAGACGA TCCACAGCCC
TACGTGCAGC AAAGCGTGGG CGTGGTGGTG CGGTTGTACT TCGCCAACCA ACTGGCATCG
GGCGAGCTGG ATCTTGAGGC GCCCGATGGT GCCTCGATGC AGCGCGTCGG CGATGACGTC
AGCTCGGTCA AGGTGCTCAA TGGACGCCAG TACAACGTGG TGGAGCGGCG CTATCTGCTG
GTGCCCGAGC GCAGCGGCCG TCTGCTGCTG CCACCGGCAC GCTTCAACGG GCGTTCGGTC
GGTGGATTTT TCGACGACTA CTTCGGGCGA GGCAACGGTG AGCTGAGTGC GCGCAGTGCC
AGCATTCCGT TGCAGGTGCG TGCGCAACCG GCCAACGCAC CGCAGCCATG GCTGCCGTTG
CGCAGCCTGC AGTTGCGCTA CACGACCACG CCACAGCGGG CGACCGCCGG TGAGGCCGCG
CAATTGGTCG TGGAAGCCAC TGCGCGCGGC GCCACCCAGG CGCAGTTTCC CGAATTGCCG
ACCCCCAGCG TGCCCGACGC GCAGGTGTTC GCCGAGCCGC CGCAGTTCGA AGAAGGCTTC
GTGGACGGCT CGCCGCAGCT GCGATTGACC AGACGCTATT CGATCGTGCC CAACCGCGCC
GGTCCCTTGG TGGTGCCTGG GTTGCAGGTG GCATGGTGGG ACGTGGCCGC AGGCGCAGCC
AAGACTGCGT CACTGCCGGA TCTGACGCTG AATGTTGCGG CAGGCAGCGG CGCGTTTGCG
ACACCTGCGC CGTCACCGGC TGCGAACCCG GCGCCCGATC GATCGGCGCC GACGACGGAT
CGCACGTTCG CCCTGCAACC ACCATCGCCC GCGCGACCGC CATGGGGCTG GATCGTGGCC
GCGGTCGGGT TTGCGTTCTT GTGGATCGCC ACGCTGGTGT GGGCGTTGCT ACGTCGGCGT
GGTACTTCGA GCAGTAGATC ACGCCGTAAT GACAGTAATG GCAGCGCTGT GCCCGCTGCT
GGCAGACGCG CAACCCATGG CGTGGCCGAG TTGCGCCGCG CGCTCGATAC CGGCGGCATG
GACGATGTGG CGGCGGTGCT CTGCGGCATG GCCGGAGTTG CCGATATCGA CGCAGTGTTG
GCGGCATTGG CAGACCCGGC GCAGCGGGCA GCCGTGGCGC GGATGCAACG CGCGCGCTGG
GGTGGCGACG GCGATGTGGC CGGCGCGTGC GCCGCCTTGC GCGAGGCGTT CGCCAAGGGA
CCACGCTGGC AGCATGCGAG CGCGGCCGAA CCAGAGGTGC TTGCGCCGTT GTATCCGCCT
GCGCCTAAGA GCGGCTAA
|
|---|
| Protein sequence | MIGRHHLRRA AIGMLASLAL LVCAPAGAVT RAWLDRDSVN VGDVAMLNIE TDQRGVDPDY
TPLRSDFSLG AKSANQQMQV TNGSVTVRAL FGVVLAPRKS GELIVPAIRV GNERTEPLRL
QVVGAANDPS GSSGRAADAP NAAQGNEEAF VETRVDDPQP YVQQSVGVVV RLYFANQLAS
GELDLEAPDG ASMQRVGDDV SSVKVLNGRQ YNVVERRYLL VPERSGRLLL PPARFNGRSV
GGFFDDYFGR GNGELSARSA SIPLQVRAQP ANAPQPWLPL RSLQLRYTTT PQRATAGEAA
QLVVEATARG ATQAQFPELP TPSVPDAQVF AEPPQFEEGF VDGSPQLRLT RRYSIVPNRA
GPLVVPGLQV AWWDVAAGAA KTASLPDLTL NVAAGSGAFA TPAPSPAANP APDRSAPTTD
RTFALQPPSP ARPPWGWIVA AVGFAFLWIA TLVWALLRRR GTSSSRSRRN DSNGSAVPAA
GRRATHGVAE LRRALDTGGM DDVAAVLCGM AGVADIDAVL AALADPAQRA AVARMQRARW
GGDGDVAGAC AALREAFAKG PRWQHASAAE PEVLAPLYPP APKSG
|
|---|
| |