Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02209 |
Symbol | |
ID | 6307474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4071314 |
End bp | 4072078 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642641213 |
Product | transcriptional regulator AhyR/AsaR family |
Protein accession | YP_001915061 |
Protein GI | 188578132 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0933251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGAAA TTCTAGCCAG CCTGGGCCGC GATCTGCAGG CGTCGCAAAC GGTTAATAGC TGCCTGGATC GGGTGTTTCG CGATGTCTGT GCGCTCGGCT TCCAGTCGTT GGTCTACGAC TACGCACCGG TGCCGCTGAG CATGGAGGGC GCGCTGATCA CGCCAACGGT GTTCATGCAG CGCAATGCGC CAGGCGATAT GCAGCATGTC TGGTGCGAGC ACGGGTACTA CCAACATGAC CCCGTTCAGC AGCGTGCAAC GCGACGTAAC ACCCCGTTCG TATGGTCGTA CCGCACCGAC GGCGATTGCG CTGGGGTGGA ATATGTGGGT GGACAGCACC GGCAAGTCAC GCGTTACTTG TGCGATAGCG GCATGGGTAC CGGTGTCACC GTGCCGCTGC ATCTGCCCGG TGGCGCGTTC GCCACCTTTA GCGCTGCGAT TGATGCCGTG GCTGCGGAAG CGCTGCGTCT GGCCGAGTCG CAGTTATTGC CCTTCTTGCT GCTGGCACAT GCTTTCCAGG CGCGTGCGCA GGAATTGCTG GACCCGCAGG AACGCCGCTG CCACCACATT CCATTGACCC GTCGCGAGCG CGAATGCCTG CAGTATTCGG CCAAAGGCCT GACCTCCAAA CGTATCGCCG CGGCGCTCAA CCGCTCCACC GCCACGGTGA ACCTGCATCT GAATTCGGCT GCCCGCAAAC TGGGGGCACG TAACCGCGTG GAAGCGGTGG TGCGTGGTAT GCACTATCGG TTGCTGGAGC CATAA
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Protein sequence | MFEILASLGR DLQASQTVNS CLDRVFRDVC ALGFQSLVYD YAPVPLSMEG ALITPTVFMQ RNAPGDMQHV WCEHGYYQHD PVQQRATRRN TPFVWSYRTD GDCAGVEYVG GQHRQVTRYL CDSGMGTGVT VPLHLPGGAF ATFSAAIDAV AAEALRLAES QLLPFLLLAH AFQARAQELL DPQERRCHHI PLTRRERECL QYSAKGLTSK RIAAALNRST ATVNLHLNSA ARKLGARNRV EAVVRGMHYR LLEP
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