| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02165 |
|---|
| Symbol | |
|---|
| ID | 6307396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4003060 |
|---|
| End bp | 4003575 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642641137 |
|---|
| Product | ISxac3 transposase |
|---|
| Protein accession | YP_001914985 |
|---|
| Protein GI | 188578056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGGTG AATTTTGCAG GGGCGACTAC AAAGTCGATG TGTTGCACGC CAACAGCACG
CGCTACCCCT GGGCGCTACG CACCCATAGC ATGAGCGGCG CTTCGGCCGA GCAGGCGCTG
CAGCAGCGCT ATGCGCGCAT CTGCGCGTAC AGCCAAAACG GCAAGCCGGA CGCGCAACGC
CAGACCTACC CGCCGATGCT GCTGGGCCTG TGGGATGCGG TGGGGGTGGT GCACGAGCTC
AACGGCTACC GGCACGACGT GGTCGCGGCG ATGGCGCGCT ACAAGGACGA GCGTGCGCTG
GAATTCAACG CGATGGAGCA TATCGAGCAG ATCGATACGC TGTTGCAGCG CAATGCGGCG
GTGTTGTCGG ATCTACCCCC CCCCCCCAAG GACGCCGCAT GCGCCGAGGT GTTCGACGAC
ATCGAAATGT TCTACAACCC ACAACGCCGT CATGGTTCAA CCGGCAACCT GTCCCCTGTA
GAGTTTGAAC GGCGCTACGC GCAACGAGGG TCTTGA
|
|---|
| Protein sequence | MFGEFCRGDY KVDVLHANST RYPWALRTHS MSGASAEQAL QQRYARICAY SQNGKPDAQR
QTYPPMLLGL WDAVGVVHEL NGYRHDVVAA MARYKDERAL EFNAMEHIEQ IDTLLQRNAA
VLSDLPPPPK DAACAEVFDD IEMFYNPQRR HGSTGNLSPV EFERRYAQRG S
|
|---|
| |