Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02054 |
Symbol | |
ID | 6307262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3855024 |
End bp | 3857573 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642641006 |
Product | Rhs element Vgr protein |
Protein accession | YP_001914854 |
Protein GI | 188577925 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGCTGG AACTGCTCAC CGCCGAATCG CACACCGCGC TGCGCCCGTT CCACGGCCAT GTCACCGCGT TCGAGCGGCT TGGCAGCAAC GGCGGCCTGG CGCGCTACCG GCTGGTGGTG GAGCCGTGGC TGGCGCTGCT GGCCCAGCGC GTGGACAGCT ACGTGTTCCA GGACATGAGC GTGGTGGAGA TCGCCGAGAG CGTATTCGCC GACTACGCCG GGCAAGGCGC GCTGGCGCCG GCGTGGCGTT GGGAGCTGTC CGACCGCAGC ACGTACGCCA GGCGCAGCCT GACCACGCAA TACGAAGAGA CCGACTTCGC GTTCCTGAGC CGGCTGCTGG CCGAGGAAGG CATCGCCTAT TGGTTCGAGC ACACCGGCGC AGCCGACAGC GCCACGCGCG GCACGCACAC GCTGGTGCTG TCGGACCATA ACGCCGCCTT CGCCGACCTG GGCACGGTGC GCTACCACCG CACCGACGTC ACCGAGCAGC AGGACAGCGT GCAGCAGTGG GTACAGGCAC ATCGCTGGCG CGCGACCAGT CTGTCGCGGG CCAGCTGGGA CTACCGCAGC CGCAGCCTGC GCCTGGCCGG CGCCGAAGGC ACGCCGCTGG GCGACATCGG TGCCGAGGAC GTGGACACCG CCGGCCCCTA CGGCTGGCAG GACAGCACGC GCGGCCAGCG CCGCGCGCAG CAGCATCTGG ATGCGCAGCA GGTGACGGCG CAGACCATCC AGGGCCAGGG GACCTGGCGG CAACTGGCGC CGGGCACGCG TTTCGGGCTG CGCCAGCATG CGGTCGTGGC GGCCGATGCG GCGTTTCTGT GCCTGCAGGT GCGGCACCAG GCGCGCAACA ACCTGGGCGC GGAGGTGTTC GACGCGCTGG AGCAGGCGCT GGGCGCGGTG GCGGTGGCCG GCGCGCCGCT GCCGCCAGCG CTGGCAGGCC TGAGCGGCGG GTATGCGCCG GCGCAGGATG AGGCGGCGGT AGAGTTCTAC CGCAACCAGT TCACCGCCAT ACCGGCCACC GCGACCTACC GGCCGCAAAC CGAGGACGGC CACGGCGTGC GCCTGCATCC CAAGCCCACG GTGGTCGGCA CGCTGAGCGC GATCGTGGTC AGCGACGGCG ACCCGGTGCA GTCCGACCGC GACCACCGGA TCAAGGTGCA GTTCCCGTTC CAGCGCGGGG CCGACGCCAG CAGCGCGCTG GCGCATCCGG GGGGCGAGGA CAACGCGCCG GGCAGCGCCT CGGCGTGGAC CTGGGTGCGG GTGATGACGC CGTGGGCCGG GGACAACTGG GGCGGCGTGG TGCTGCCGCG CAAGGGCCAG GAAGTGCTGG TGGGGTTCCT GGAAGGGGAC ATCGACCGGC CGGTGGTGAT CGGCAGCGTG TACAACGGGC GCGGCCAGGA CGAGGCGGCG CACAACCAGG TCGGCGGCGG CGGGGCCGGG GCCACCGGCA ATGCGCCGGC GTGGTTCCAG GGCAACGCGC ACGGTGCGGT GTTCACCGGG TTCAAGAGCC AGGCGCTGGC GCAGAGCCAG GACGGCACCG GCGGCTACCA GCAGCTGCGG CTGGACGACA CGCCCGGCCA GGGCCGCGCG CAGCTGTCGA CCACCCAGCA CGCCAGCAGC TTGACCCTGG GCCACCTGAA GGGCGGCCAC GACAACCTGC GCGAAGGCGA GCGCGGGTAC GGGGCGGACC TGTCCACGCA GGCCTACGGC GCGGTGCGCG CCGGCCAGGG CCTGCTGCTG AGCAGCGAGC CGGGCAACAC CCAACTGGCC GCCACCGGCG CGCTGAGTCA ACTGCAGCAG GGCAGCGACC TGCTCAAGCG CCTCAACGAC GCCGCCCGCA CCCAGCAGGC GGGCCTACCG AGCGAACCGG AGTCCCTGCC GACCCAGGAC GGCCTGAAGA CCTTGCAGGA CCACCTGCAG GCCACCCACA CCGGCAGCGC GGCCGGCGAG ATCGGCGGTG GCGCCGGCGA GGTGCCCGGC TGGAGCGCCC CAGTGCTGCT GGGCAGCGGC CAGGCCGGCG TGATGAGCCT GACCCCGGCC GATCAGGTGT GGGTGTCGGG CACCCAGACC GCGCTGCTGG CCGGCAGCGC ACTGAACTGG CTGAGCCAGG GCCACCTGGT GCTGGCGGTG GCCGGCGGGC TGGTGCTGTA CACCCAGGGC GGCGACCCGG TCGCCGGCAG CCCCAACCAG GAGCGCGGCA TCGCCCTGCA CGCCGCGCAA GGCACGCTCA GCGCCCGCGC GCACAAGAAC ACCGCCACCC TGGCCGCCAA GACCCAGGTG CGCATCGTCA GCACCACCGC CGACGTCCAG CTCACCGCGC CGACCAGGCA CCTGCTGGCC ACCGCGGCCG GCGCCTACAT CAAGCTGGAC GGCGACGACA TCGAACTGGG CGCGCCGGGG GTGGTCGCGT TCAAGGGCGG GCAGCAGGTG TTGACGGCGC CGCAGGGGGC ATCCATGAGC CCCGTGACGC CATCCGCCAG CCACAAGCTG TGTGAATACA CCGCCCGCGC GGCAGATTTC GCCGGTGCAG GGACGATGGG GGCCGCCTGA
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Protein sequence | MLLELLTAES HTALRPFHGH VTAFERLGSN GGLARYRLVV EPWLALLAQR VDSYVFQDMS VVEIAESVFA DYAGQGALAP AWRWELSDRS TYARRSLTTQ YEETDFAFLS RLLAEEGIAY WFEHTGAADS ATRGTHTLVL SDHNAAFADL GTVRYHRTDV TEQQDSVQQW VQAHRWRATS LSRASWDYRS RSLRLAGAEG TPLGDIGAED VDTAGPYGWQ DSTRGQRRAQ QHLDAQQVTA QTIQGQGTWR QLAPGTRFGL RQHAVVAADA AFLCLQVRHQ ARNNLGAEVF DALEQALGAV AVAGAPLPPA LAGLSGGYAP AQDEAAVEFY RNQFTAIPAT ATYRPQTEDG HGVRLHPKPT VVGTLSAIVV SDGDPVQSDR DHRIKVQFPF QRGADASSAL AHPGGEDNAP GSASAWTWVR VMTPWAGDNW GGVVLPRKGQ EVLVGFLEGD IDRPVVIGSV YNGRGQDEAA HNQVGGGGAG ATGNAPAWFQ GNAHGAVFTG FKSQALAQSQ DGTGGYQQLR LDDTPGQGRA QLSTTQHASS LTLGHLKGGH DNLREGERGY GADLSTQAYG AVRAGQGLLL SSEPGNTQLA ATGALSQLQQ GSDLLKRLND AARTQQAGLP SEPESLPTQD GLKTLQDHLQ ATHTGSAAGE IGGGAGEVPG WSAPVLLGSG QAGVMSLTPA DQVWVSGTQT ALLAGSALNW LSQGHLVLAV AGGLVLYTQG GDPVAGSPNQ ERGIALHAAQ GTLSARAHKN TATLAAKTQV RIVSTTADVQ LTAPTRHLLA TAAGAYIKLD GDDIELGAPG VVAFKGGQQV LTAPQGASMS PVTPSASHKL CEYTARAADF AGAGTMGAA
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