| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02029 |
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| Symbol | |
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| ID | 6307288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3889002 |
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| End bp | 3891788 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642641032 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001914880 |
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| Protein GI | 188577951 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGTCCG ACAGCGGCCG CCTATACCGC TTGCAGCTGC CTGGCGGGGA TGTCCAGGTG
GTGGAGCGCT GGAGCGGGTC GGAACGGCTG AGCGGCGGTT TTGAGTGGTG GGTGGACGTG
CTGAGCACGC AGGCGGGCTT GCCGCTGGAG GCGTGGCTGG GGCGGCGCGC GACGCTGTAC
ACCCGGCTGG CCGATGGCGA TGAAAGCCCG CGCACGGGGT TGATCCACGA CGCGTACGTA
CTGGGCAGCG ATGGCGGGCT GGCGCGCTAC CGGGTAGGCC TGGTGCCGTG GACGTGGTGG
TTGTCGCAGG GCCGGCACAG CCGGGTATTC CAGGAACGCA CGCTGGTGCA GATCGTGGAA
GCGGTGTGCG CCGACTACGC GCCGATGGCA AGCTGGCAGT GGAGCGAGGA GACGAGCGCG
TTCCTGGCCC AGGCGCGGCC GCGCAGCTAC TGCGTGCAGT ACCGCGAGAG CGACCTGGAT
TTCGTGCAGC GGCTGCTGGC CGAGGAAGGC CTGGGCTGGC GGCTGCAGGA GGCGGACGCG
TCGCCCGGCG GGCACCAGCT GGTGGTGTTC GCCGACAGCG CCGCGCAACC GCAGGACCCC
AGTTCGGCGC AGGGCGGGGG GCTGCGCTAC CACCGCAGCG ACGCCACCGA GGCGGCCGAC
AGCGTGCTGG CGATCGGCGC CACCCGGCGG CTGGGCAGCG GCCGGCTGAC GGTGCTCAGC
GAGGACTTCA AGACGCGCCA GGCGCGCAGC GCGCAGTTGC CGTTGCACGG CGGCGGCAGG
CAGTCGCTGC GCGAGGTGTA CGAGCCGGTG GGGATGGATG CCTTCGCCAG CGCGCAGGCA
GCAGACCGCT CTGCGGAGTT GATGGCGCAG GCGCACGAGG CGCAGTGGTC ACCGTGGCAG
GGCCGCAGCA CGGTGCGCAC GCTGCGCGCC GGCACCTGGT TCACGCTGAC CCAGGCACCG
CAGCAGGGCC AGGCGCCGCC GGCGCAGCTG TTGCTGACGC GGGTGTGGCA TGCGGGTATC
AACAACTTGC CGGTGGACGT GCGCGCGGCG GTGCAGTCGC AGTTGGGGGC CGCGCCGGCG
TGGCCGGACG CCAGCGCGGT GGCCGCACGC AGCACCTGGG CGCAGGCCGA GGCGGTGGGC
TACGGCAACG CCTTCGAGGC GGTGGACCGG CAGCAGCCGT GGCGGCCGGT CCTGGCCGAC
GGCACCGGGG CGCGGCTGCA CCCGCGGCCG ACCGCGCCGG GCTACCAGAG CGCCATCGTG
GTCGGTGCCG ATGGCAGCAC CGACGGCAGC CAGGAGGTCC ATGCCGACGC GCTGGGCCGG
ATCCGGGTCA GGTTTCACTT CCAGCACGCC GCGTCGGCCC CGGCCGCGCA GGACAGCACG
TGGCTGCGGG TGGCGCAGCG CTACGCCGGC CCGGGCGTGG GCAGCCAGTT CCTGCCGCGC
ATCGGCCAGG AAGTGCTGGT GGGCTTCCTG GAGGGGGACA TCGACCGTCC GGTGGTGCTG
GGGGCGCTGT ACAACGGCAA GGGCGAAGCC GGCGTTCCTG CCACCCCCGG CGGCACCAGC
GCCGAGGCCG ACACCGGCCT GTACGCCCAG GCCGGCGACG GCAGACCCAG CGCGCAGGGC
AACCTGGCCG GCGGCCATGC CCCGGCCTGG CACGGCGCCG GCGGCGGCGC GGACAACCAC
CGCAACGCCA CCGCGCTGTG GGGCGTGCAA TCCAAGGAAT GGGGCGGCGC TGGCCACAGC
CGGCTGGTGT TCGACGACAG CGACCAGCAA CTGCGCTTGC AACTTGCGAC CACCCAGGCA
GCCACGCAAC TGAACCTGGG GCACCTGATC CACCAGGCCG ACAACTACCG CGGCAGCTTC
CGCGGGGAAG GCTTCGAACT GCGCACCGAC GCGTGGGGCG CGGTGCGTGC CAGCTCGGGG
CTATGGCTGA GCAGCTACGG CCGCAGCGGC GGCCCGGCCG GCGAGGCGAC CCAGCCCAGC
GCATTGCTGA GCCAGCTGCA GACGCTGGGC AAGACGTTCT CGCAGGCGGC GGGCACGCAC
CAGACGGTGA AGCTGGCCGC GCACGAAGGC GTGGGCCAGG CGAACCACTC CCAGCTGATC
GCCGAGCAGG CGCCGCTGCC GGCGCTGCTG ACCAGCGTGA AGACCACGGT GCCGGGCACG
GCCTACGCCG ACGCCAAGGG CGCGGCGGCC GAGCGCAGCG CCAGCCCGGG CGATGACCGG
GTGCCGCACA CCGGCGATGC GCTGCTGGGC CTGGCCGCAC CAGCGGGGAT CGGCGTGGTG
GCCGGCCAGG GCCTGAGCTG GAGCGTGGGC GAGACGCTGA CGCTGGCCAG CGGCGCGGGC
AGCGAAGCGG CCATCGCCGG CGACGCCCGG CTGCACAGCG GCCAGGCAAT CGGCGTGCTG
GCCGCGGCGG TGGACGGCGG GCAAACGCAA GCCAACAGCC TGAGCCTCGT CAGCGGCGAA
GGCGCGCTGG ACGTGCAGGC GCAGTCGGAC GAAGTACGGG TGCAGTCGAA AGAAGGACTG
AAGCTGATCA GCGCCAACGC CGACGTGGCA CTGGCGGCGG GCAAGACCCT CCACCTGGCG
GTGGCCGGCG GGGCCAGCGT GACCATCGAA GCCGGCAACA TCACCGTCGC CTGCCCCGGC
ACCATCACCG TGCATGCGAG CAAGAAGTCG TTTGTGGGGC CGGTGCAGCA GGCGTATCCG
TTGCCCGCGT TCGCAAAGTC GGTCTGCATC CCGTGCCTGT TGCAGGCCAT GGGCAAGGGG
CAAGCGTTGT CCCCGGTGAA TGGGTGA
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| Protein sequence | MLSDSGRLYR LQLPGGDVQV VERWSGSERL SGGFEWWVDV LSTQAGLPLE AWLGRRATLY
TRLADGDESP RTGLIHDAYV LGSDGGLARY RVGLVPWTWW LSQGRHSRVF QERTLVQIVE
AVCADYAPMA SWQWSEETSA FLAQARPRSY CVQYRESDLD FVQRLLAEEG LGWRLQEADA
SPGGHQLVVF ADSAAQPQDP SSAQGGGLRY HRSDATEAAD SVLAIGATRR LGSGRLTVLS
EDFKTRQARS AQLPLHGGGR QSLREVYEPV GMDAFASAQA ADRSAELMAQ AHEAQWSPWQ
GRSTVRTLRA GTWFTLTQAP QQGQAPPAQL LLTRVWHAGI NNLPVDVRAA VQSQLGAAPA
WPDASAVAAR STWAQAEAVG YGNAFEAVDR QQPWRPVLAD GTGARLHPRP TAPGYQSAIV
VGADGSTDGS QEVHADALGR IRVRFHFQHA ASAPAAQDST WLRVAQRYAG PGVGSQFLPR
IGQEVLVGFL EGDIDRPVVL GALYNGKGEA GVPATPGGTS AEADTGLYAQ AGDGRPSAQG
NLAGGHAPAW HGAGGGADNH RNATALWGVQ SKEWGGAGHS RLVFDDSDQQ LRLQLATTQA
ATQLNLGHLI HQADNYRGSF RGEGFELRTD AWGAVRASSG LWLSSYGRSG GPAGEATQPS
ALLSQLQTLG KTFSQAAGTH QTVKLAAHEG VGQANHSQLI AEQAPLPALL TSVKTTVPGT
AYADAKGAAA ERSASPGDDR VPHTGDALLG LAAPAGIGVV AGQGLSWSVG ETLTLASGAG
SEAAIAGDAR LHSGQAIGVL AAAVDGGQTQ ANSLSLVSGE GALDVQAQSD EVRVQSKEGL
KLISANADVA LAAGKTLHLA VAGGASVTIE AGNITVACPG TITVHASKKS FVGPVQQAYP
LPAFAKSVCI PCLLQAMGKG QALSPVNG
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