| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02002 |
|---|
| Symbol | pyrB |
|---|
| ID | 6307310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3915236 |
|---|
| End bp | 3916174 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642641054 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_001914902 |
|---|
| Protein GI | 188577973 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCG ATTCGGACGG ACGCCTGCGC CACCTTCTCA CCCTGGAAGG AGTGCCGCGT
ACCACGCTGC TGCAATTGCT CGACCGCGCC GGCCAGATCC GCGATGCGGC GGTGGGGCGC
GTGGGCAAGC GCAGCGTGCT GGCGGGCACC GCGGTGTGCA CGCTGTTCTT CGAACCCTCC
ACGCGCACGC GCAGTTCCTT CCATCTGGCG GCGCAGCGAC TGGGTGCGGA CGTGCTCAAT
TTCGATGCCT CCACCTCATC CACCCGCAAG GGCGAAACCG CGCGCGACAC GCTGAAGAAT
CTCGAAGCGA TGGGTGTGCG CGGCTTTGTG GTGCGTCACC CCGACGACGG CGCGGTGAAA
GCGCTGGCCG CCGCAGCAGG CGAGGGCACC GCGTTGATCA ATGCCGGCGA CGGACGCAGC
GCTCATCCTA CCCAGGGCCT GCTCGACATG CTCACCCTGC GCCAGGCCAA GGGAACCGAT
TTTTCCAAGC TCAAGGTCGT CATCGTCGGC GACGTCAAGC ACTCACGGGT GGCGCGCTCG
GACCTGCATG CCCTGCGCAC GCTGGGCGCT GGCGAAATCC GCGTCTGCGG CCCGGCCAGC
CTGCTACCTG ACGACGGCAT ACTGGAGGGC TGCGTAGTCG GTCAGGATTT CGATGCCATG
CTCGAAGGCG CCGACGCGTT GATGATGCTG CGCCTGCAGC GCGAGCGTAT GGAAGAAGGC
TTGGTGCCGT CGCTGGAGCA ATATCACACC GAATACGGCC TGACCCGCGA GCGTCTTGCG
CGCGCCGGCC ATGATGCTGC GGTGCTGCAT CCGGGCCCGA TCAACCGCGG CGTGGAAATC
ACTGATGAAG TGGCCGACGG CGCGCAATCC TGCGTGCTGC GGCAGGTCGC CAACGGCGTC
GCCGTGCGCA TGGCGGTACT GGAAACGCTG CTGGGCTAA
|
|---|
| Protein sequence | MQLDSDGRLR HLLTLEGVPR TTLLQLLDRA GQIRDAAVGR VGKRSVLAGT AVCTLFFEPS
TRTRSSFHLA AQRLGADVLN FDASTSSTRK GETARDTLKN LEAMGVRGFV VRHPDDGAVK
ALAAAAGEGT ALINAGDGRS AHPTQGLLDM LTLRQAKGTD FSKLKVVIVG DVKHSRVARS
DLHALRTLGA GEIRVCGPAS LLPDDGILEG CVVGQDFDAM LEGADALMML RLQRERMEEG
LVPSLEQYHT EYGLTRERLA RAGHDAAVLH PGPINRGVEI TDEVADGAQS CVLRQVANGV
AVRMAVLETL LG
|
|---|
| |