| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01993 |
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| Symbol | |
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| ID | 6307319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3921874 |
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| End bp | 3922911 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642641063 |
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| Product | twitching motility protein |
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| Protein accession | YP_001914911 |
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| Protein GI | 188577982 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.913118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCG CTGAACTATT GGCGTTTTCT GTCAAGAACA AGGCATCGGA CCTGCACCTG
TCTGCAGGGC TGCCGCCGAT GATCCGTGTC GATGGCGATG TCCGCCGCAT CAATATTCCG
GCGCTGGACC ATAAGCAGGT GCATGCGCTG GTGTACGACA TCATGTCGGA CAAGCAGCGG
CGCGATTACG AGGAATTCCT CGAAGTCGAC TTCTCGTTCG AAATTTTGTC GCTGGCGCGT
TTCCGCGTCA ATGCGTTCAA CCAGAACCGC GGCGCCGGTG CGGTGTTCCG TACCATTCCC
TCCGAAGTGC TGACGCTGGA AGACCTGGGC TGCCCGCCGA TCTTCCGCCA GCTGATCGAC
CAGCCGCAGG GCTTGATCCT GGTGACCGGC CCGACTGGTT CGGGCAAGTC GACCACGCTG
GCCGGCATGA TCGACTACAT CAACAAGAAC GAATACGGCC ACATCCTCAC CGTCGAGGAC
CCGATCGAAT TCGTGCACAC CTCGCAGAAG TGCCTGATCA ATCAGCGCGA GGTGCGCCGC
GACACGCACG GCTTCAACGA GGCGCTGCGC TCGGCGTTGC GCGAAGACCC GGACATCATC
CTGGTCGGCG AATTGCGCGA CCTGGAAACC ATCCGCCTGG CGCTGACCGC CGCGGAAACC
GGCCACCTGG TGTTCGGCAC CCTGCACACC AGCTCGGCGG CCAAGACCAT CGACCGCATC
ATCGACGTGT TCCCGGCCGG CGAAAAGCCG ATGGTGCGCT CGATGCTGTC CGAATCGCTG
CGCGCAGTGA TTTCGCAGGC GCTGCTGAAG AAAGTCGGCG GCGGGCGTAC CGCAGCATGG
GAAATCATGG TCGGCACCCC GGCCATCCGC AACCTGATCC GCGAGGACAA GGTGGCGCAG
ATGTATTCCT CGATCCAGAC CGGCCAGCAA TACGGCATGC AGACGCTCGA CCAGCACCTG
CAGGACCTGG TCAAGCGCAG CCTGATCACG CGCAACCAGG CGCGCGAGTA CGCCAAGGAC
AAGCGGATAT TCGAATAG
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| Protein sequence | MDIAELLAFS VKNKASDLHL SAGLPPMIRV DGDVRRINIP ALDHKQVHAL VYDIMSDKQR
RDYEEFLEVD FSFEILSLAR FRVNAFNQNR GAGAVFRTIP SEVLTLEDLG CPPIFRQLID
QPQGLILVTG PTGSGKSTTL AGMIDYINKN EYGHILTVED PIEFVHTSQK CLINQREVRR
DTHGFNEALR SALREDPDII LVGELRDLET IRLALTAAET GHLVFGTLHT SSAAKTIDRI
IDVFPAGEKP MVRSMLSESL RAVISQALLK KVGGGRTAAW EIMVGTPAIR NLIREDKVAQ
MYSSIQTGQQ YGMQTLDQHL QDLVKRSLIT RNQAREYAKD KRIFE
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