Gene PXO_01980 details

Gene Information

• Locus tag: PXO_01980
• Symbol: rrf2
• ID: 6307332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3931296
• End bp: 3931754
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642641076
• Product: Rrf2 family protein
• Protein accession: YP_001914924
• Protein GI: 188577995
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator); [TIGR02944] FeS assembly SUF system regulator, gammaproteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.491455
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGCGCG TCACCAAACT CACCGATTAC GCCACCGTTG TGCTGACCGT CCTGGCGGCA 
CGCTGCGATC AGGTGCTCAG CGCAAGCGAG TTGGCCGAAC AGGCCGGCCT GGAAGCGCCG 
ACCGTCAGCA AGATTCTCAA GCCGCTGTCG CAAGCGGGCC TGGTCGAAGG CTTACGCGGC 
GTGCACGGCG GTTACCGGCT TGCGCGCGCG GCCAGCGACA TCACCTTGGT GGAGATCGTC 
GAAGCGATGG AAGGCCCATT GGCGATCACC GAATGCAGCC ATAACCATAG CCAGTGCGGC 
ATCGCACACA CATGCGGCGT GCGTTCCAAT TGGCGCTTGA TCAACGACGT GGTCGGCGAT 
GCCTTGCGTC GCGTCACGCT CGCGCAGATG TTGCAGCCCC TCTCCCACCC TGGCGACACC 
CGTCAGCGTT CCATCGCCGC ACGCGTCGCG ACCACCTGA 

 

Protein sequence

MLRVTKLTDY ATVVLTVLAA RCDQVLSASE LAEQAGLEAP TVSKILKPLS QAGLVEGLRG 
VHGGYRLARA ASDITLVEIV EAMEGPLAIT ECSHNHSQCG IAHTCGVRSN WRLINDVVGD 
ALRRVTLAQM LQPLSHPGDT RQRSIAARVA TT