Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01943 |
Symbol | |
ID | 6307369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3968211 |
End bp | 3970103 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642641111 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001914959 |
Protein GI | 188578030 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGACGCG GCGAGCGTCT GCTGCTCTCC AACGTCGACC TGACCATGCA CGCCGGCTAC CGCGTCGGCG TGGTGGGCCG TAACGGCACC GGCAAGTCGA GCCTGTTCGC TGCAGTGAAG GGCGAGCTGG AGGCCGACAA GGGCGATGTC GATCTGCCCG GCAAGGTGCG CACCGCCAGC GTGTCGCAGG AAACCCCGTC GCTGCCCGAC CCGGCGCTGT CGTTCGTGCT CGGCGGCGAC ATCGAAGTTT CCGCAGTGCT GCAGGAAGAG GCCGATGCCA CTGCCCGCGA GGACTGGGAG GCGGTGGCCA ACGCACACCA GAAGATGGCC GAACTCGGCG CCTACGACGC CGAAGCGCGC GCCGGCAAGT TGCTGCACGG CCTGGGCTTC CCGGCCGACA CGCACCACCG CGCGGTGTCT TCGTTCTCCG GCGGCTGGCG GGTGCGGCTG AATCTGGCGC GCGCGCTGAT GATGCCCAGC GACCTGCTGC TGCTCGACGA ACCGACCAAC CATTTGGACA TGGACGCGGT GCTGTGGCTG GAGCAGTGGT TGCTCAAGTA CCCGGGCACG CTGCTGCTGA TTTCGCACGA CCGCGAATTT CTCGACAATG TGGCGACCCA CACCCTGCAT CTGCATGGCG GTACCGCCAA GCTGTATGTC GGTGGCTACA CCGATTTCGA ACGCCAGCGC ATCGAGCACC TGCGCCAGCA GCAGATCGCG CACGACAAGG AACAGGCCGA GCGCGCGCAT CTGCAGAGCT TCATCGACCG CTTCAAGGCG CAGGCCAGCA AGGCCACCCA GGCGCAGAGC CGCATGAAGC GCCTGGCCAA GATGGCCGGT ACCGAAGCCG TGCGCGCCGA GCGCGAGTTC CGCATCCAGT TCGCGCAGCC CAATCGGCTG CCGTTTTCGT TGATCCGGTT GAATCACGCG GCTTGCGGCT ACACCGCTGC GCCGCGGGAT TCGGGAGTGG GGATTGGGGA TTGGCAAAAG CAGGGCACTG CGGATGCGAT TACCGTGTTG CATGACGTCG GGTTTGGCTT GGAAGCGGGC GACCGGATTG GCTTGCTGGG GCCCAATGGC GCAGGTAAGT CGACGCTGGT GAAGACGCTG GTGGGCGAGC TGGCACCGTT GGCGGGCGAG CGCAGTGCGC ATCCGGACCT GCGCATTGGC TACTTCGCAC AGCACACGGT GGAATCGCTG CATGAAGGCC AGTCGCCGAT GGATCACTTC CGCGACCTGT CACCGGATGG CTCCAATCAG GCGTTCCGCG ACTTTTTGGG TAAGTGGAAT TTCGCCGGCG ACCGCGCCTT CGAAGTGGTG GACGGCTTCT CCGGCGGCGA GCGCGCGCGC CTGGCGCTGG CGCTGATCGC TTGGCAGCAG CCGAACGTGC TGCTGCTCGA CGAGCCGACC AACCACTTGG ACCTGGAAAT GCGCGAAGCG CTGGCCGAGG CGTTGAGCGA TTTCGAAGGG GCCATCGTGA TGGTCTCGCA CGATCGCCAT CTGATCGGCT TGGTCTGCGA CAGTTTCTGG CGCGTGGCCG ATGGTGTGGT CGAGCCATTC GCCGGCGACC TGGACGAATA CGCCGCCTGG TTGCGGAGCC GCCCGGCCGC GCAGGGCACC AAGCAGAAGA TGGCCGAAGT GGCGCCGACC CCGCCACCGC CGACCAAGCC GCTGCCGCCG AAGAAAGCCG TCAACCCGCA CAAGCTGGCC AGCGCCGAAA AGCGCGTCGG CGAACTGGAA GCGGCGCTGG CCGCGCTGGA TCGCGAACTG GCCAACCCGG GCAACTACGC CGACAGCGAG AAGATGGCCG TGCTTGGGCG TGACCGCGAG GCAACCGCGC AGCAGCTGGC TGAAGCTGAG ACGGCGTGGA TGGAGTTGAT CGACGGTGCG TAA
|
Protein sequence | MRRGERLLLS NVDLTMHAGY RVGVVGRNGT GKSSLFAAVK GELEADKGDV DLPGKVRTAS VSQETPSLPD PALSFVLGGD IEVSAVLQEE ADATAREDWE AVANAHQKMA ELGAYDAEAR AGKLLHGLGF PADTHHRAVS SFSGGWRVRL NLARALMMPS DLLLLDEPTN HLDMDAVLWL EQWLLKYPGT LLLISHDREF LDNVATHTLH LHGGTAKLYV GGYTDFERQR IEHLRQQQIA HDKEQAERAH LQSFIDRFKA QASKATQAQS RMKRLAKMAG TEAVRAEREF RIQFAQPNRL PFSLIRLNHA ACGYTAAPRD SGVGIGDWQK QGTADAITVL HDVGFGLEAG DRIGLLGPNG AGKSTLVKTL VGELAPLAGE RSAHPDLRIG YFAQHTVESL HEGQSPMDHF RDLSPDGSNQ AFRDFLGKWN FAGDRAFEVV DGFSGGERAR LALALIAWQQ PNVLLLDEPT NHLDLEMREA LAEALSDFEG AIVMVSHDRH LIGLVCDSFW RVADGVVEPF AGDLDEYAAW LRSRPAAQGT KQKMAEVAPT PPPPTKPLPP KKAVNPHKLA SAEKRVGELE AALAALDREL ANPGNYADSE KMAVLGRDRE ATAQQLAEAE TAWMELIDGA
|
| |