| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01939 |
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| Symbol | |
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| ID | 6307372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3973883 |
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| End bp | 3976270 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642641114 |
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| Product | TonB-dependent outer membrane receptor |
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| Protein accession | YP_001914962 |
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| Protein GI | 188578033 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGCA AGACCAGTCC ACTCGCAGTT GCCGTTGTTC TTGCACTGTC GTTTTCCGCT
TCCACCGCCG CTGCACAGTC GCAGGCGCCG ACCCAGAAAA CACTGGACAC CCTGATCGTG
ACCGGCACGC GCGTGGCCGA TCGCACGGTC GCCGAATCGG CATCGCCGAT CGACATCATC
TCGCCACAGG CGCTGGAATC GACCGGCACC ACCGAATTGG CGACCGCGCT CTCCCGCGCG
ATTCCCTCGC TCAATTTCCC GCGCCCGGCC ATCTCCGACG GCTCGGACGC CGTGCGCCCG
GCGCAGCTAC GCGGGCTGTC GCCCGATCAG GTCCTGGTGC TGGTCAACGG CAAGCGCTAT
CACAGCACCG CGTTGATCAA TCTCAACGAC ACCCAGGGGC GCGGCTCTTC GCCGGCCGAC
CTCAATACCA TTCCGATCGC AGCGGTGGAG CGTATCGAAG TATTGCGCGA TGGTGCATCC
GCGCAATACG GCTCGGATGC CATCGCCGGT GTGATCAACA TCGTGCTCAA GGGCAGCGGC
GAAGGCGGCA GCGTGAATGG CCGCTACGGC AAGTACAGCG CGGGCGACGG CGAGCAATAT
CAGGTGTCCG GCGATGCCGG TTTCAGCTTC GCCGGCACCG GCAAGGTACA TCTGGCCGCG
CAGGCCGGGC ACTCGGATCA GACCAACCGC GCGTTGCCCT ACCAGGGGCG TGTGGAGCAG
CGTTACGGCG ATCCCGAGAT CGACCAGGGC GCCGTCTCGT TCAACGGCGA ATACAGCCCC
ACCGATTACC TGACCTTCTA CTCGTTCGGC ATGGTCAGCC GGCGCGAAGT GTTGTCCAAC
GGCTATTTCC GCTCTGCCGG CGACAACCGC AACCGCCCGG AAATCTATCC GGACGGCTTC
CTGCCGCAGA TCTACAACGT CAGCAAGGAC GTCTCGTGGG TGGGTGGTTT GAAGACCTCC
ACAGAAGGCG GCTTGAACAT CGATCTGAGC TACAACTACG GCCAGAACAA TCTCACCTTC
GATGTGCGCA ACAGCTTGAA CAACAGCCTG GGCGTGACCA GCCCGACCGA CTTCCACGCC
GGCACGCTGG AAGTGACCCA GAACGTGCTC AATGCCGATT TCACCAAGAC GCTGGATTGG
GGATTGGCGT ATCCGGTCAC GCTGGCGTTC GGAGCGGAAT GGCGCGGCGA GAAGTTCAAT
GAGTCGCCGG GCGATGCGGC CTCGTCGGCC AACGGTGGCA TTCCCTCCGC CAACGGATCG
TTGATTCCCG GCGCGCAGGT GTTCCCGGGC TTCAAGCTCT CCGATTCCGG TTACTACAAC
CGCAACAGCC ATTCGGCCTA CGTCGATCTG GAAGCGGATC TGACCGCGAA GTTCTCCGCC
GGACTGGCCG GGCGCTACGA GAAGTACAGC GACTTCGGCG ATACCGCCAC CGGCAAGCTG
TCGTTGCGCT ACGCGTTCAC CGACAAGGTC GCGTTGCGCG CCACCGCCTC CACCGGCTTT
CGCGCGCCGT CGCTGCAGCA GCAAAACTTC CAGTCGATCG CCACCCAGTT CCTCAACGTG
GCGCAGCCCG ACGGCAGCGT GACCGCGATT CCGTTCGAGA TCGGCACCTT CCGCACCGAT
AACCCGGCCG CGATCGCGCT GGGCGCTGAG CCGCTCAAGG CCGAAGAATC CAGGAATTAC
GGCCTGGGCG TGGTGTTGCA ACCGGTCGAG AATCTGTACA TCACCGTCGA CGCGTATCGC
ATCGATATCG ATGACCGCAT CGTGCTGTCG GAGAACCTCA CCTCAGACGC CGCGCGCAAC
TATCTGCAGA CCAACGGCTT CCCGGGCATT GGCGGCGGGC GTTACTTCAC CAATGCGGTG
GACACCAAAA CGCAGGGCGT GGATGCGGTC GGCACCTATC GCTGGAATCT GGATGGCGGC
AGCGCCGAGC TGACCTCTGG CTACAACTAC AACAAGACCG AAGTGAAACG CATCGCCGAC
AACCCGGCCG CGCTGATGGC GATCGACCCG AATGCGGTGC GCATCGGCCG CGCCGAACTC
GGTCGTATCA CCGAAGGGAC GCCACGCGAC AAATTCTTCC TCGGTGGCAC CTGGTCGCCG
GGCAACTGGT CGTTCACCGG CACTGCCACG CGCTGGGGCG AGTTCAGCAC CTTCGGCACC
AACGCTGGTA GCGACCAGAC CTATGCGGCC AAGTGGACGC TGGATCTGGC CGCGTCCTAC
ACGCTGGGCG CGTGGAGCTT CACCGTCGGT GGCGACAACG TGCTCAACGA ATATCCAGAC
CGCCAGCAAG CGGGTTTGGG CACGCGGACC TACCTGCCCT ACAGCAGCAC CTCGCCGTTC
GGTTTCAACG GCGCGCTGGT GTATGCAAAC GTGAATTACA AGTGGTAA
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| Protein sequence | MNCKTSPLAV AVVLALSFSA STAAAQSQAP TQKTLDTLIV TGTRVADRTV AESASPIDII
SPQALESTGT TELATALSRA IPSLNFPRPA ISDGSDAVRP AQLRGLSPDQ VLVLVNGKRY
HSTALINLND TQGRGSSPAD LNTIPIAAVE RIEVLRDGAS AQYGSDAIAG VINIVLKGSG
EGGSVNGRYG KYSAGDGEQY QVSGDAGFSF AGTGKVHLAA QAGHSDQTNR ALPYQGRVEQ
RYGDPEIDQG AVSFNGEYSP TDYLTFYSFG MVSRREVLSN GYFRSAGDNR NRPEIYPDGF
LPQIYNVSKD VSWVGGLKTS TEGGLNIDLS YNYGQNNLTF DVRNSLNNSL GVTSPTDFHA
GTLEVTQNVL NADFTKTLDW GLAYPVTLAF GAEWRGEKFN ESPGDAASSA NGGIPSANGS
LIPGAQVFPG FKLSDSGYYN RNSHSAYVDL EADLTAKFSA GLAGRYEKYS DFGDTATGKL
SLRYAFTDKV ALRATASTGF RAPSLQQQNF QSIATQFLNV AQPDGSVTAI PFEIGTFRTD
NPAAIALGAE PLKAEESRNY GLGVVLQPVE NLYITVDAYR IDIDDRIVLS ENLTSDAARN
YLQTNGFPGI GGGRYFTNAV DTKTQGVDAV GTYRWNLDGG SAELTSGYNY NKTEVKRIAD
NPAALMAIDP NAVRIGRAEL GRITEGTPRD KFFLGGTWSP GNWSFTGTAT RWGEFSTFGT
NAGSDQTYAA KWTLDLAASY TLGAWSFTVG GDNVLNEYPD RQQAGLGTRT YLPYSSTSPF
GFNGALVYAN VNYKW
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