Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01924 |
Symbol | cobT |
ID | 6307387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3995025 |
End bp | 3996071 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642641128 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_001914976 |
Protein GI | 188578047 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.573566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTAACG ATTGGATCTT TGGTGCCTGC GCCGTGCCGG ACGCGCGGAT GCGCTCTGCT GCGTTGGCCC GGCAGGAACA ACTGACCAAA CCGCCGGGCG CATTGGGCCG GCTGGAACAA CTGGCCGTGC AAGTGGCGGC CTGGCAACGT ACCGAACATC CTGCGGTGCA GCGGGTCTGG ATTGCGGTGT ATGCCGCCGA TCATGGTGTG GCGGCCGAAG GCGTGTCGGC ATTTCCGCAG GCAGTCACCG GCGAGATGGT GCGCAATTTC GCGCGCGGCG GCGCGGCTAT TGCGGTCCTG GCGCGCGAGC TGGGTGCGCG GCTGGAAGTG GTGAATCTGG GGGTTGTCAA CGACCCCGGC GACTTGTCGC GCGTGCGGCG TGCCTGGATT GCGCCGTCCA CTGCCAATAT CTGCGAGCAG CCCGCGATGA CGGCCACGCA ATTGCGCGAT GCGCTCGCCG CTGGTGCCCA CAGCATTGCG CAGGCCAAGA GTTGCGACAC GCAGCTGTTT GTCGGCGGCG AAATGGGCAT TGGCAACACC ACCGCCGCTG CAGCGCTGGG CTGCGCGTTG CTCTCGCAGT TTCCGCAGGC GCTGGCTGGC GCAGGCACCG GCCTGGATGC CGAAGGCATC GCGCACAAGG TCACCGTGAT CACGCGTGCG CTGGCCTTGC ATGCCGATGC CTCCACCCCG CTGGAGCGTC TGCGCCGGCT CGGCGGATTC GAAATCGCGG CATTGGTCGG CGCGTATATC GCTGCGGCGC AGGCGGGCAT TCCGGTGTTG GTGGATGGCT TCATCGCCAC CGCCGCGGCA TTGGTGGCTA CCCGCCTGAA CCCCGGCGTG CGCGAGTGGT TGTTGTTCGG GCACCGTTCG CAGGAGCGCG GGCATGCGGC ACTGCTGCGT GCGCTGGATG CAGAGCCCTT GCTGCAACTG GACCTGCGGC TGGGAGAAGC CAGCGGCGCC GCGGTGGCGA TTCCGTTGCT GCGCAGCGCC TGCGCGTTGC ATAACGGCAT GGCGACCTTC GCCGAAGCCG GAGTGTCGGA CGCATGA
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Protein sequence | MSNDWIFGAC AVPDARMRSA ALARQEQLTK PPGALGRLEQ LAVQVAAWQR TEHPAVQRVW IAVYAADHGV AAEGVSAFPQ AVTGEMVRNF ARGGAAIAVL ARELGARLEV VNLGVVNDPG DLSRVRRAWI APSTANICEQ PAMTATQLRD ALAAGAHSIA QAKSCDTQLF VGGEMGIGNT TAAAALGCAL LSQFPQALAG AGTGLDAEGI AHKVTVITRA LALHADASTP LERLRRLGGF EIAALVGAYI AAAQAGIPVL VDGFIATAAA LVATRLNPGV REWLLFGHRS QERGHAALLR ALDAEPLLQL DLRLGEASGA AVAIPLLRSA CALHNGMATF AEAGVSDA
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