Gene PXO_01906 details

Gene Information

• Locus tag: PXO_01906
• ID: 6307086
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3665772
• End bp: 3666437
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642640833
• Product: outer membrane lipoprotein
• Protein accession: YP_001914682
• Protein GI: 188577753
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0791] Cell wall-associated hydrolases (invasion-associated proteins)

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.211693
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATTTCAG CACTTCCCGC ATTCGCGCAG ACCGCCAGCA GTACGCCATC CGCTCCGCAG 
ACGACCACGC CTGACAGCAC CGTCGCCGCC GAGAAAGCCG CAACCCGCAG CCGCGCCGAT 
GCCGCTGCCA CTGCAACGCT GGCCGCCCTG CTTCCGCACC TGGCTGCAAA CGACGCCATT 
CCGCTGATGG ACCGCTCGGC AATGTTCGCC GGCGATCTCA GCCGCCTGCT TGCCAATTAC 
GACGTGTCGC AGAGCGCAGC CAATGCTGCA CAGAACGCCG TGGCCGACAG CCGCGTGCAG 
GTGATCCTGC AGCGCGCCAT GGCCCTGCTC GGCACTCCGT ATGTCTGGGG CGGCGAGTCC 
ACCGAAGGGT TCGATTGCAG CGGCTTGGTC GGCTATGTGT TCAAGACTGC GCTCGGCATT 
GATCTGCCGC GCGTCTCGCG CGACATCGCC CGCGACGAAT CGGCCGAACT GATCAAGGAC 
CCAAGCGCGC TGAAGGCTGG CGACCTGGTG TTCTTCGGCA AGCGCGGTCG TATCGACCAT 
GTCGGCCTGG TGGTCGGCGA CGGCAAGTTC CTGCACGCGC CCAGCCGCGG CAAGGACGTG 
CGCGTGGATT CGCTGGCGAG CGGCTACTGG AGCGAGAAGT TCATCCAAGC GCGTCGGGTG 
CTGTAA 

 

Protein sequence

MISALPAFAQ TASSTPSAPQ TTTPDSTVAA EKAATRSRAD AAATATLAAL LPHLAANDAI 
PLMDRSAMFA GDLSRLLANY DVSQSAANAA QNAVADSRVQ VILQRAMALL GTPYVWGGES 
TEGFDCSGLV GYVFKTALGI DLPRVSRDIA RDESAELIKD PSALKAGDLV FFGKRGRIDH 
VGLVVGDGKF LHAPSRGKDV RVDSLASGYW SEKFIQARRV L