| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01859 |
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| Symbol | glgX |
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| ID | 6307136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3717404 |
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| End bp | 3719536 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642640883 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001914732 |
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| Protein GI | 188577803 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACGTC CAGCAAGCGC GGCTTATGCC AATCCTTCCC GTATCCGTCA GGGGCGCCCG
TTCCCCCGCG GCGCCGTCTT CGACGGCAAG GGCACCAATT TCGCGCTATT TTCCGCGCAT
GCAACGCGTG TGGAAGTGTG CCTGTTCGAC GAACAGGGCA ACGAAACCCG TGTCGACCTT
CCCGAGTACA CCAACGAAAT CTGGCACGGG TATCTGCCCG ATACCAAACC CGGCCAGCGC
TATGGCTATC GCGTGCATGG CCCCTATGCG CCGACCGAAG GTCACCGCTT CAATCACAAC
AAGCTGTTGC TTGACCCCTA TGCGCGCGAA CTGGAAGGCG ACCTGATCTG GGCCGACGAG
CTCTACGGTT ACACCGTAGG CCACCCTGAT GGCGACCTGA GCTTCGACGA GCGCGACAGT
GCGCCCTTCA TGCCCAAGTG CGTCGTGGTC GAAGACATCT ACGATTGGGG CGACGACACA
CGCCTGCTCA AGCCCTGGAA CGAAATGGTC ATTTACGAGA CCCATGTGCG CGGTTACACG
ATGGGCAACC CGCAGGTGCC CGAAGCGGTG CGCGGCACCT TCGCCGGCCT GGCACAGCCG
CAGGTATTGC AATACATCAA GGACCTTGGC ATCACCGCAG TAGAACTGTT GCCGGTGCAT
GCGTACCTGG ACGACCAGCA TCTGCTGGAC AAGGGACTGC GTAATTACTG GGGCTACAAC
ACCATCGGCT TTTTCGCACT GAAATCGCGC TACCTGGCCA GCGGTCATCG CGACGAGTTT
CGCGACATGG TCAAGGCCAT GCACAAGCAG GGGCTGGAAG TGATTCTGGA CGTGGTCTAC
AACCACACCG CCGAAGGCAG CGAACTGGGG CCGACACTGT CGTTCAAGGG CATCGACAAC
GCCAGCTATT ACCGTCTGGC CGAAGACAAG CGCTATTACA TCAACGACAC CGGCACCGGA
AATACGCTCA ATCTGAGCAA TTCACGGGTG ATACAGTTCG TCAACGATTC GCTGCGTTAC
TGGGCCGGCG AAATGCACGT GGATGGCTTC CGTTTCGACC TGGCCACGAT TCTTGGCCGC
GAGCCAAGCG GTTTCGATCA ACGTGGCGGC TTCCTGGATG CCTGCAATCA GGACCCGCTG
CTGTCGGAGG TCAAGCTGAT TGCCGAGCCG TGGGACTGTG GCCCGGGCGG TTATCAGGTG
GGTCATTTCC CGCCGGGCTG GTCGGAGTGG AACGACAAAT TTCGCGACAA CGCACGCGAA
TTCTGGAAAG GCGAAGACGG CAAACTGGCG GAGTTTGCGA CCCGCTTTAC CGGTTCGGCC
GACCTATTCG ATCGACGCGG CCGTCGCCCG TGGGCGTCGG TGAACTTCAT CACCGCGCAC
GATGGCTTCA CCCTGCGCGA TCTGGTCAGC TACAACGAAA AGCACAACAT CGATAACGGC
GAAGACAACC GCGACGGCTC GTCGAACGAC GGCTCCTGCA ATTACGGCGA GGAAGGCGAG
ACCGACAACG CCGAAATACT GCAGATCCGC GAGCGACAGA TGAAAAACCT GCTCGCTACC
TTACTGCTAT CGCAAGGCGC GCCGATGATG CTCAGCGGCG ACGAGCGTGG GCAAACGCAG
GGTGGCAACA ACAACACCTA TTGCCAGGAT AACGCAATCA CCTGGCTGGA TTGGGAAAAC
GATCCGACCG ACGGCCGCCT GACCGACTTC GTCAAGGCGC TGACCAAGTT GCGCAAGCGC
TACCCGATCC TGTCGCGCGG CCGCTTTCTC AATGGTCAGT ACAACGAAGA AGCGGGCGTG
CGCGATCTCA CCTGGCTCAA CCCGGGCGGC ATCGAAATGG ACGATGCGCA CTGGACCGAT
GCCAGCGCGC GCTCGGTTGG GCTGCTGCTC GAAGGCAAGG CGCAGACCTC CGGCGTCAAG
GAATTGGCCA ACGATGACAC CTTGCTGATC GTCATCAATG CGTATCACGA GGGCGTGAGC
TTTACCCTGC CTTCCTCGGA TGAACCGGTG CACTGGAAGC TGGTGCTTTC GACCGACGAA
GCGCTGGAAG TGGACATGAT GCCGGCCGCT GCCAGCGAAT TCCTGGCCCC ACCGCGCAGC
GTGTCGGTCT TCGAGTGCAA GAGCGATCAA TAA
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| Protein sequence | MRRPASAAYA NPSRIRQGRP FPRGAVFDGK GTNFALFSAH ATRVEVCLFD EQGNETRVDL
PEYTNEIWHG YLPDTKPGQR YGYRVHGPYA PTEGHRFNHN KLLLDPYARE LEGDLIWADE
LYGYTVGHPD GDLSFDERDS APFMPKCVVV EDIYDWGDDT RLLKPWNEMV IYETHVRGYT
MGNPQVPEAV RGTFAGLAQP QVLQYIKDLG ITAVELLPVH AYLDDQHLLD KGLRNYWGYN
TIGFFALKSR YLASGHRDEF RDMVKAMHKQ GLEVILDVVY NHTAEGSELG PTLSFKGIDN
ASYYRLAEDK RYYINDTGTG NTLNLSNSRV IQFVNDSLRY WAGEMHVDGF RFDLATILGR
EPSGFDQRGG FLDACNQDPL LSEVKLIAEP WDCGPGGYQV GHFPPGWSEW NDKFRDNARE
FWKGEDGKLA EFATRFTGSA DLFDRRGRRP WASVNFITAH DGFTLRDLVS YNEKHNIDNG
EDNRDGSSND GSCNYGEEGE TDNAEILQIR ERQMKNLLAT LLLSQGAPMM LSGDERGQTQ
GGNNNTYCQD NAITWLDWEN DPTDGRLTDF VKALTKLRKR YPILSRGRFL NGQYNEEAGV
RDLTWLNPGG IEMDDAHWTD ASARSVGLLL EGKAQTSGVK ELANDDTLLI VINAYHEGVS
FTLPSSDEPV HWKLVLSTDE ALEVDMMPAA ASEFLAPPRS VSVFECKSDQ
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