Gene PXO_01831 details

Gene Information

• Locus tag: PXO_01831
• Symbol: mscL
• ID: 6307165
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3741626
• End bp: 3742048
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642640911
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001914759
• Protein GI: 188577830
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.514761
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAATGG TCAGCGAATT CAAGCAATTC GCAATACGCG GCAATGTCAT CGACCTGGCG 
GTCGGTGTGG TCATCGGCGC GGCGTTCGGC AAGATCGTCA CCGCGCTGGT GGAGAAAATC 
ATCATGCCGC CGATCGGCTG GGCCATCGGC AACGTGGATT TTTCGCGCCT GGCGTGGGTG 
CTCAAGCCGG CCGGCGTCGA TGCCACCGGC AAGGACATTC CAGCAGTTGC TATCGGCTAT 
GGCGATTTCA TCAACACCGT CGTGCAGTTC GTGATCATCG CCTTTGCGAT CTTTCTGTTG 
GTCAAGTTGA TCAACCGCGT CACCAATCGC AAGCCGGATG CCCCGAAGGG CCCGAGCGAA 
GAAGTGCTGT TGCTGCGCGA GATCCGCGAC TCGCTCAAGA ACGACACGCT TAAGAGCGGC 
TAA 

 

Protein sequence

MGMVSEFKQF AIRGNVIDLA VGVVIGAAFG KIVTALVEKI IMPPIGWAIG NVDFSRLAWV 
LKPAGVDATG KDIPAVAIGY GDFINTVVQF VIIAFAIFLL VKLINRVTNR KPDAPKGPSE 
EVLLLREIRD SLKNDTLKSG