| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01821 |
|---|
| Symbol | |
|---|
| ID | 6306498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3066041 |
|---|
| End bp | 3066445 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642640252 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001914109 |
|---|
| Protein GI | 188577180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000045905 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGTCG CCGGCGCTGG TATTGCCGCT GCTGGTCGCC CACGCCTGAT GGCCAGCCTG
GCGTACATGA AGCACGCCGA CAAGCTCAGC GGCGAGGAAC GGGTGCAGCG CTTGGCCGAG
AACGTGGTCT GGCAGCACGT CAGCGGCATG GTGTTCTATG CGCCGCGCCT GCCCTGCGAT
GCCATGCAGG TCGGGCGTTT TCGCGCTGCC ATCGGTGAGG CCGGGGGCGA GGAATGGCTC
AAGGCCACCA TCGACACCGC GGTGTCCTCG CTGTCACTGG GGGCCGGGGT TTTTCAGGAG
CGAATACTGC GCCTGCGCCA AGCCCAGCAG CAGGGTGGGA TCGTCGCGAT ACAGGGAATC
AGTGGCTGCG AGCGGCCATG GTGGGATTCT CAGCGGCCTT CGTAG
|
|---|
| Protein sequence | MQVAGAGIAA AGRPRLMASL AYMKHADKLS GEERVQRLAE NVVWQHVSGM VFYAPRLPCD
AMQVGRFRAA IGEAGGEEWL KATIDTAVSS LSLGAGVFQE RILRLRQAQQ QGGIVAIQGI
SGCERPWWDS QRPS
|
|---|
| |