Gene PXO_01717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01717 
Symbolrnc 
ID6306600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp3167421 
End bp3168101 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID642640354 
Productribonuclease III 
Protein accessionYP_001914211 
Protein GI188577282 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.622323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGAATA GAATCTTCCA ACGCGGTGAT CCGATCGGGC ATGCATTTGC CGATCCGGAT 
CTGCTCGCCC AGGCGCTGCG GCATCGCAGC GCCGGGACGC CGCACAACGA GCGGCTGGAA 
TTTCTCGGCG ACGGCATCGT CAATCTGCTG GTCGCCGAGG CGCTGTATCA ACGTTGGCCC 
AAGGCCGATG AAGGCGCATT GACCCGCGCG CGGGCCGAAC TCGTACGCGA AGGCGCGCTG 
GCAGTGATCG GACGTACGTT GAACCTCGGC GAGCGCCTCA CGCTGGGTCC AGGTGAGTGG 
AAGTCCGGTG GTCATCGGCG CGATTCGATC CTGGCCGATG CTGTCGAAGC GATTGTCGCG 
GCCATCTACC TGGACTGCGG TTTCGAGCGT TGCCGTGCGG TGGTGCTGCC GTGGTTCGAA 
GCCTCGCTGG CGGCATTGCC GGTTGGCAAG GCAGAAAAAG ATCCCAAGAC CCGGCTGCAG 
GAATGGCTGC AGGCGCGCCA GCTGCCGCTG CCCAATTACG CTCTGATCAG TGAGAGCGGC 
GATGAGCATG CCAAGCAGTT CCATGTCGCC TGCATTCTGG AGCAGCCCGT CGCCCGCGCC 
GAGGGCCAGG GCACCTCGCG TCGTCTTGCC GAGCAACAGG CGGCGACTCT TGTCATCGCA 
CAACTGGATT CAAGAATGTG A
 
Protein sequence
MSNRIFQRGD PIGHAFADPD LLAQALRHRS AGTPHNERLE FLGDGIVNLL VAEALYQRWP 
KADEGALTRA RAELVREGAL AVIGRTLNLG ERLTLGPGEW KSGGHRRDSI LADAVEAIVA 
AIYLDCGFER CRAVVLPWFE ASLAALPVGK AEKDPKTRLQ EWLQARQLPL PNYALISESG 
DEHAKQFHVA CILEQPVARA EGQGTSRRLA EQQAATLVIA QLDSRM