Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01704 |
Symbol | |
ID | 6306613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3181347 |
End bp | 3182528 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642640367 |
Product | acyl-CoA dehydrogenase family member 8 |
Protein accession | YP_001914224 |
Protein GI | 188577295 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.791292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCAA CCATCCAGCT CTATCCCAAC GCGGCCGATT TGAACGACGA GCAGCAAGCC TTTCGCGCCG CCGCCCGCGA TTTTGCCGAT AAAGAACTCG CCCCGCACGC GGCGCAGTGG GACGCAGAAG GTCACTTCCC GCGCGAGGCG ATCGCCAAGG CCGCAGCGTT GGGCTTTTGC GGGCTTTACA CCGACCACGG CGTGGGCGGC CTGGGCATGC GCCGGCTCGA TGCGGCGGTG GTGTTCGAAG AGCTTGCCAC GGTGGATCCA TCCACCTCGG CCTTCATCAG CATCCACAAC ATGGTCACCT GGTTTATTGC CAGCTACGGC ACCGATGCGG TGCGCGCGCA GTGGGGCGAG GCGATGACCA GCGGTGCCAG ACTCGGCTCC TACTGCCTGA CCGAACCGGG CAGCGGCTCG GACGCAGCAT CGTTGAAATC CCGTGCACAG CGCGATGGCG ACAGCTACGT GCTCAATGGC AGCAAGGCCT TCATCTCCGG TGCCGGCGCG ACCGATGTGC TGGTGGTGAT GGCACGCACC GGCGAAGACG GCGCACGCGG CATCAGCGCG TTCGCGGTGC CGGCCGATGC CCCCGGCATC AGCTATGGCC GCAAGGAAGA AAAGATGGGC TGGAACAGCC AGCCCACGCG CGGTGTGACC TTAGAAAACG TGCGCATTCC TGCCGAGAAC CTGCTTGGCA AGGAAGGCGA AGGTTTCAAG ATGGCGATGA AGGCGCTGGA TGGTGGACGC ATCAATATCG CCGCGTGTTC GTTGGGCGCA GCGCAAGGCG CGCTGGATGC CGCGCGGCGC TACATGGGCG AGCGCCGCCA GTTCGGTAAG ACGCTGGCCG ATTTCCAGGC CCTGCAGTTC AAGCTGGCCG ATATGGCCAC GCAACTGGTG GCCGCGCGGC AGATGGTGCA CACCGCTGCA CGCAAGCTCG ATGCCGGCAG CCACGATGCC ACCGTGTGGT GTGCGATGGC CAAGCGCTTC GCCACCGATG CAGGCTTTGC CATCTGCGAC GATGCCTTGC AGATCCACGG CGGCTACGGC TATATCCGCG AGTATCCAAT CGAGCGCTTG CTGCGCGACA GCCGCGTGCA CCGCATTCTG GAAGGTACCA ACGAGGTGAT GCGCATGATC GTGGCGCGTC ATCTGCTCAA TGGCGAGGAG GAACTGCGAT GA
|
Protein sequence | MNATIQLYPN AADLNDEQQA FRAAARDFAD KELAPHAAQW DAEGHFPREA IAKAAALGFC GLYTDHGVGG LGMRRLDAAV VFEELATVDP STSAFISIHN MVTWFIASYG TDAVRAQWGE AMTSGARLGS YCLTEPGSGS DAASLKSRAQ RDGDSYVLNG SKAFISGAGA TDVLVVMART GEDGARGISA FAVPADAPGI SYGRKEEKMG WNSQPTRGVT LENVRIPAEN LLGKEGEGFK MAMKALDGGR INIAACSLGA AQGALDAARR YMGERRQFGK TLADFQALQF KLADMATQLV AARQMVHTAA RKLDAGSHDA TVWCAMAKRF ATDAGFAICD DALQIHGGYG YIREYPIERL LRDSRVHRIL EGTNEVMRMI VARHLLNGEE ELR
|
| |